Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01287 ATGACAATGGCCGACAACCGTCTAGCTTTTTCTCTTGTGTACCCTGAGTTTCTGCTTATGGCTTTGATGATCTTTGTAGCTCTGCCTCATGTCCTCGCAAATACTGACTCTTCTGATGCTGAAGCACTTCAGGTTGTGTATACGGCATTAAACAGTCCATCTGAGCTAACTGGTTGGAAAAGCAGTGGAGGTGATCCATGTGGAGAGACGTGGAAGGGGGTGACATGTGAGGGTTCATCCGTTACATCCATTGATGTTTCAGGCTTGGGACTCCATGGTACAATGGGATATCGGCTTTCGGACCTTTCCTCTTTGAGAACACTTGACTTGAGCAACAATAACATCCACGATACAATTCCCTATCAGTTGCCACCAAATCTTACTAGCCTTAACCTTGCTGGTAACAACTTAAGTGGAAATCTACCCTATTCCATTTCTTCAATGACGGCTTTAAATTATCTGAATTTGAGTCGTAACGTGCTGTCCCAAGCAGTAGGGGATATATTCACACATCTTGCTGCCCTTGGAACCCTGGATTTTTCTTTCAATAACTTCTCTGGGGATCTTCCTAGTTCCTTTAGTTCATTATCCAACCTCTCTTCACTGTATTTACAGAACAATCAGTTGACAGGTTCTCTTAATGCTCTTGTTGACTTGCCTTTAGATACTCTAAATGTTGCAAACAATCGCTTCACTGGATGGATACCTCATGAGCTGAGCTCAGTCCACAATTTCATATCCGATGGAAATTCATTTGACAATGGTCCTGCTCCTCCTCCTCCACCATATGTTTCACCTCCTCCCACTAGATCTCATGTTAGACACAATCATTCTGGATCTGGCATGCATCCATCACGGAGTTCTGGTGATAAAGTTTCTCATAAGGATAATGGTTTGACTGTTGGGGCTATTGTAGGCGTTGCTTTGGGTTCAGCAGCTGTAACTCTTATCGTGCTTATTGCCCTTGTTTTCTGTGTTCGGAAGAGTAAACATAGGGAAGGTGGCTCTAGTGCTTCTAGGAATGGTGTTGGAACAAACAATGCACCTTCTGATTTGCAAGAGCAGAGGGTGAAGAATGCCGCAGGTGTTACAGATCTTAAACCTCCTCCAGTAGAGAAATTGACGGTCGAGAGTGTTCAGGTGAAAAGTGGATCTTTGAAGAGAATGAAGTCCCCAATAACTGCTACTTCGTACACCGTCGCTAATCTCCAGAGTGCAACAAATAGTTTCAGTCAAGAATTTATCATTGGGGAGGGTTCCCTTGGTCGAGTTTATAAAGCAGAATTCCCCAATGGGAAGGTCATGGCCATAAAGAAAATCGATAATGCAGCACTATCTCTACAGGAGGAAGATAATTTTCTCGAATCCATTTCAAATATGTCACGGCTACGACACCCAAACATTGTTACATTGGCTGGATATTGTGCTGAGCATGGGCAGCGCCTTTTAGTTTATGAGTACATTGGAAATGGAAATTTACACGATATGCTCCATTTTGCTGATGATAGCAGTAAACATCTGTCTTGGAATGCCCGTGTACGAATTTCACTTGGCACTGCTCGAGCTTTAGAGTACTTGCATGAAGTATGCCTTCCTTCTGTTGTACATAGAAATTTCAAGTCAGCAAATATATTACTTGATGAAGAATTCAATCCACATTTATCTGACTGTGGCTTGGCAGCTTTAACGCCAAATACAGAGCGACAGGTTTCAACTCAAATGGTTGGCTCATTTGGCTACAGTGCTCCAGAGTTTGCCTTGTCAGGGATATACACTGTAAAAAGTGATGTTTACAGCTTTGGTGTGGTGATGCTGGAGCTATTGACTGGTAGGAAGCCTCTTGATAGTTCGAGGGTTAGATCGGAACAATCACTAGTAAGATGGGCTACCCCACAGTTGCATGATATAGATGCATTGGCCAAAATGGTCGATCCTGCACTCAATGGCATGTATCCTGCAAAGTCTCTCTCACGTTTTGCTGACATCATTGCTCTCTGTGTTCAGCCGGAACCGGAGTTTCGACCCCCCATGTCTGAAGTTGTGCAAGCATTGGTGAGACTACTGCAAAGAGCAAGTGCTGTCAAAAGGCGTCCCAGCGATGATTCTGGTTTTGCTTATAGGAACCCTGATCATGAAGCCATAGACATGTCATTTTGA 2157 0.4363 MTMADNRLAFSLVYPEFLLMALMIFVALPHVLANTDSSDAEALQVVYTALNSPSELTGWKSSGGDPCGETWKGVTCEGSSVTSIDVSGLGLHGTMGYRLSDLSSLRTLDLSNNNIHDTIPYQLPPNLTSLNLAGNNLSGNLPYSISSMTALNYLNLSRNVLSQAVGDIFTHLAALGTLDFSFNNFSGDLPSSFSSLSNLSSLYLQNNQLTGSLNALVDLPLDTLNVANNRFTGWIPHELSSVHNFISDGNSFDNGPAPPPPPYVSPPPTRSHVRHNHSGSGMHPSRSSGDKVSHKDNGLTVGAIVGVALGSAAVTLIVLIALVFCVRKSKHREGGSSASRNGVGTNNAPSDLQEQRVKNAAGVTDLKPPPVEKLTVESVQVKSGSLKRMKSPITATSYTVANLQSATNSFSQEFIIGEGSLGRVYKAEFPNGKVMAIKKIDNAALSLQEEDNFLESISNMSRLRHPNIVTLAGYCAEHGQRLLVYEYIGNGNLHDMLHFADDSSKHLSWNARVRISLGTARALEYLHEVCLPSVVHRNFKSANILLDEEFNPHLSDCGLAALTPNTERQVSTQMVGSFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRVRSEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLLQRASAVKRRPSDDSGFAYRNPDHEAIDMSF* 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01287 718 Gene3D Ribonuclease Inhibitor 36 259 IPR032675 -
Pte9g01287 718 MobiDBLite consensus disorder prediction 254 268 - -
Pte9g01287 718 SMART LRR_typ_2 148 171 IPR003591 -
Pte9g01287 718 SMART LRR_typ_2 102 130 IPR003591 -
Pte9g01287 718 SMART LRR_typ_2 172 195 IPR003591 -
Pte9g01287 718 SMART LRR_typ_2 196 219 IPR003591 -
Pte9g01287 718 MobiDBLite consensus disorder prediction 271 287 - -
Pte9g01287 718 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 36 263 - -
Pte9g01287 718 SUPERFAMILY L domain-like 42 244 - -
Pte9g01287 718 MobiDBLite consensus disorder prediction 331 353 - -
Pte9g01287 718 ProSiteProfiles Leucine-rich repeat profile. 198 220 IPR001611 GO:0005515
Pte9g01287 718 ProSiteProfiles Leucine-rich repeat profile. 104 125 IPR001611 GO:0005515
Pte9g01287 718 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 375 487 - -
Pte9g01287 718 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 488 698 - -
Pte9g01287 718 SUPERFAMILY Protein kinase-like (PK-like) 389 684 IPR011009 -
Pte9g01287 718 MobiDBLite consensus disorder prediction 336 353 - -
Pte9g01287 718 Pfam Leucine rich repeat 125 185 IPR001611 GO:0005515
Pte9g01287 718 CDD STKc_IRAK 416 687 - -
Pte9g01287 718 ProSiteProfiles Protein kinase domain profile. 410 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte9g01287 718 MobiDBLite consensus disorder prediction 250 294 - -
Pte9g01287 718 Gene3D Transferase(Phosphotransferase) domain 1 488 709 - -
Pte9g01287 718 Pfam Protein kinase domain 413 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte9g01287 718 Gene3D Phosphorylase Kinase; domain 1 372 487 - -
Pte9g01287 718 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 124 688 IPR046959 -
Pte9g01287 718 Pfam Leucine rich repeat N-terminal domain 37 76 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01287 Pte-Chr9 34322272 34328354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01287 148 719 Strubbelig Receptor Gene Family AT4G22130 69.983 0.0 795
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Pte9g01287 Pkinase 4.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01287 - - qsa:O6P43_031282 1077