Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte9g01281 | ATGAGTCAACTGGGTATGATATTACAGGAATCGGTCCGGAGAGACAGGGAGGCCAGAACCATTTTGGGTTTGTTGAGAGAGCAAATGGATGGTGTAGATAGAGTCGGCGTTCGGAGAAGGAGCCTCAAGGAACGGCTAGGATTCAAAAGTATAGGTTGCTGTGGTGCCGCCTGGGGTTTCAGACCGACACCCATTCGCGTTAGTCACGACGAAGAAGAACAAGAACGTCTCGATGAATCCAACGCGGGTCAAATACATGTTAATTCGGATCCGGATTCTGATGAGCCGACACTATCCACTTCTTCGGGTATGAACTTAGCGGCGGCCTTAGCAGCAGAGCGTCAATTTCGTGCGGCTGACGACGGCGATGGAGGTAACGGAGATGGAGCAGCAACGGGGAGTAGCATGCTAGGGACGCCATTACGAGTGTCATTAATGAGATTGCTTGAGGAAACGGACGGAGGGGAGGTCGATAACGCGACGCCTTTAACGGAAACGGAGAAAGGAGGTACAGGGTATGATCTGGTGTGCTGCGTGTGCATGGTAAGGAAGAAAGGAGCAGCCTTCATCCCATGTGGTCACACGTATTGCAGGGTGTGTTCGAGGGAGCTATGGTTGAATCGAGGTTCTTGTCCCCTCTGCAATCGACTCATTCTCGAGATTTTAGACATCTTCTGA | 678 | 0.5133 | MSQLGMILQESVRRDREARTILGLLREQMDGVDRVGVRRRSLKERLGFKSIGCCGAAWGFRPTPIRVSHDEEEQERLDESNAGQIHVNSDPDSDEPTLSTSSGMNLAAALAAERQFRAADDGDGGNGDGAATGSSMLGTPLRVSLMRLLEETDGGEVDNATPLTETEKGGTGYDLVCCVCMVRKKGAAFIPCGHTYCRVCSRELWLNRGSCPLCNRLILEILDIF* | 226 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte9g01281 | 225 | MobiDBLite | consensus disorder prediction | 118 | 137 | - | - | |
Pte9g01281 | 225 | MobiDBLite | consensus disorder prediction | 69 | 101 | - | - | |
Pte9g01281 | 225 | PANTHER | OS01G0917900 PROTEIN | 4 | 225 | - | - | |
Pte9g01281 | 225 | SUPERFAMILY | RING/U-box | 171 | 221 | - | - | |
Pte9g01281 | 225 | MobiDBLite | consensus disorder prediction | 81 | 101 | - | - | |
Pte9g01281 | 225 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 171 | 224 | IPR013083 | - | |
Pte9g01281 | 225 | Pfam | Zinc finger, C3HC4 type (RING finger) | 175 | 218 | - | - | |
Pte9g01281 | 225 | SMART | ring_2 | 177 | 214 | IPR001841 | - | |
Pte9g01281 | 225 | CDD | RING-HC | 175 | 214 | - | - | |
Pte9g01281 | 225 | ProSiteProfiles | Zinc finger RING-type profile. | 177 | 215 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte9g01281 | Pte-Chr9 | 34254925 | 34256499 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte9g01281 | 21 | 226 | C3H Transcription Factor Family | AT4G22250 | 53.333 | 4.14e-58 | 181 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte9g01281 | - | - | zju:107409202 | 253.832 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pte9g01281 | 9 | 34254925 | 34256499 | Pte9g01281 | 9 | 34254925 | 34256499 | RCT |