Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01281 ATGAGTCAACTGGGTATGATATTACAGGAATCGGTCCGGAGAGACAGGGAGGCCAGAACCATTTTGGGTTTGTTGAGAGAGCAAATGGATGGTGTAGATAGAGTCGGCGTTCGGAGAAGGAGCCTCAAGGAACGGCTAGGATTCAAAAGTATAGGTTGCTGTGGTGCCGCCTGGGGTTTCAGACCGACACCCATTCGCGTTAGTCACGACGAAGAAGAACAAGAACGTCTCGATGAATCCAACGCGGGTCAAATACATGTTAATTCGGATCCGGATTCTGATGAGCCGACACTATCCACTTCTTCGGGTATGAACTTAGCGGCGGCCTTAGCAGCAGAGCGTCAATTTCGTGCGGCTGACGACGGCGATGGAGGTAACGGAGATGGAGCAGCAACGGGGAGTAGCATGCTAGGGACGCCATTACGAGTGTCATTAATGAGATTGCTTGAGGAAACGGACGGAGGGGAGGTCGATAACGCGACGCCTTTAACGGAAACGGAGAAAGGAGGTACAGGGTATGATCTGGTGTGCTGCGTGTGCATGGTAAGGAAGAAAGGAGCAGCCTTCATCCCATGTGGTCACACGTATTGCAGGGTGTGTTCGAGGGAGCTATGGTTGAATCGAGGTTCTTGTCCCCTCTGCAATCGACTCATTCTCGAGATTTTAGACATCTTCTGA 678 0.5133 MSQLGMILQESVRRDREARTILGLLREQMDGVDRVGVRRRSLKERLGFKSIGCCGAAWGFRPTPIRVSHDEEEQERLDESNAGQIHVNSDPDSDEPTLSTSSGMNLAAALAAERQFRAADDGDGGNGDGAATGSSMLGTPLRVSLMRLLEETDGGEVDNATPLTETEKGGTGYDLVCCVCMVRKKGAAFIPCGHTYCRVCSRELWLNRGSCPLCNRLILEILDIF* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01281 225 MobiDBLite consensus disorder prediction 118 137 - -
Pte9g01281 225 MobiDBLite consensus disorder prediction 69 101 - -
Pte9g01281 225 PANTHER OS01G0917900 PROTEIN 4 225 - -
Pte9g01281 225 SUPERFAMILY RING/U-box 171 221 - -
Pte9g01281 225 MobiDBLite consensus disorder prediction 81 101 - -
Pte9g01281 225 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 171 224 IPR013083 -
Pte9g01281 225 Pfam Zinc finger, C3HC4 type (RING finger) 175 218 - -
Pte9g01281 225 SMART ring_2 177 214 IPR001841 -
Pte9g01281 225 CDD RING-HC 175 214 - -
Pte9g01281 225 ProSiteProfiles Zinc finger RING-type profile. 177 215 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01281 Pte-Chr9 34254925 34256499 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01281 21 226 C3H Transcription Factor Family AT4G22250 53.333 4.14e-58 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01281 - - zju:107409202 253.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g01281 9 34254925 34256499 Pte9g01281 9 34254925 34256499 RCT