Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01249 ATGCAAACATCAAAGAAGTGCCAGAATGCAGCCAGTATACATGGGTTGTATCATCAGCCCATACAAGATACCGATCAATACCAATTGTCTCAATTTCAAATTCTGGAAAATAATGCTTATACGGAAATTACTAGTCAGCAAACAAATGTATCTTTTGGGAACTTAAAGAAACAGTACTTTACCCTGGAGTCATCTTCAGCAACTGCAGGTGGTAGTGCCTGTGATTCCCCTTCTGGTGCAAGTGTCTCATCTAGCAGGAGTCCATTTTCACCTCAGGTTTCCCAGTCATGCTTGTCTGATCAGCATCATTCCTCTGATAACACCTATGGATCACCAATGAGCGGGACATCAACCGCTAATGATAGCAATGGATTGAAGCATAAACTAAGAGAGCTGGAGATTTCATTATTGGGGCCTGAATCTGATATTGTTAACAGTTGTTATTGCTGCTTCAAGGGCGGCTTCCAGCAAGACTCATCTGATTGGGATCAACTAATGGCAATGATACCTAGGTTGAACTTAAGACAAGTTCTGATTGCCTGTGCTCAAGCAATGGCTGATGCTGATATGCCAAAAGCATTAGGCTTCATGGACGTGTTAGGACAAATGGTGTCAGTTTCTGGGGAGCCAATACAACGGTTAGGTGCTTACTTATTGGAAGGTCTAAGAGCAAGGTTGGAGTCATCAGGAAGTTCAATCTACAAAGCGTTGAAATGTGAAGAACCAACTAGCTCAGAACTGATGAGTTATATGCATATCCTCTATCAGATTTGCCCATACTGGAAGTTTGCTTACACATCTGCAAATGCAGTTATTGTAGAAGCAATGGAGAATGAACCCAGAATTCATATAATTGACTTTCAGATTGCACAGGGCAGTCAGTGGATTTCTTTTATCCAAACTGTTGCCGGTCGTTATAGCGGTCCTCCATACATTCGCATCACTGGTGTTGATGATTCTCAATCATTTCATGCTCGTGGTGGAGGACTTGATATTGTAGGACAAAGATTAGCAAAAGTTGCTGAATCATGTGGAGTGCCATTTGAGTTCCATAGTGCTGCAATGTCTGGTTGTGAGGTACATCTTGAAAATCTCGGAATTCGACCTGGGGAAGCTGTTGGTGTAAATTTTCCATTTGTACTGCACCATATGCCCGATGAGAGTGTGACATTACAGAATCATAGAGATAGGTTAATGAGGTTAGTCAAGAGATTATCGCCAAAAGTTGTGACGCTTGTCGAGCAAGAATCAAACACCAACACTTCCCCATTCTTTCAGAGGTTTTGTGAGACACTAGATTATTATGCTGCCATGTTTGAATCAATCGATGTAGCGCTTCCTAGAGATGATAAGAAGAGAATCAATGCAGAGCAGCAGTGTGTAGCCAGAGACATAGTGAACATGATTGCTTGTGAGGGGATTGAAAGGGTTGAACGACATGAACTTCTAGGAAAGTGGAGGTTAAGATTTAGCATGGCTGGTTTTACACCATACCCTTTAAGCTCTTCAGTAACAAATGCAATCAAAGGTGTATTGGAAGAATACAATGATAATTACACACTTAATGAGAGGGATGGAGCACTCTATCTTGGCTGGAAGAGCAGAGATATGGCCACCTCTTCTGCGTGGAGATGA 1635 0.4196 MQTSKKCQNAASIHGLYHQPIQDTDQYQLSQFQILENNAYTEITSQQTNVSFGNLKKQYFTLESSSATAGGSACDSPSGASVSSSRSPFSPQVSQSCLSDQHHSSDNTYGSPMSGTSTANDSNGLKHKLRELEISLLGPESDIVNSCYCCFKGGFQQDSSDWDQLMAMIPRLNLRQVLIACAQAMADADMPKALGFMDVLGQMVSVSGEPIQRLGAYLLEGLRARLESSGSSIYKALKCEEPTSSELMSYMHILYQICPYWKFAYTSANAVIVEAMENEPRIHIIDFQIAQGSQWISFIQTVAGRYSGPPYIRITGVDDSQSFHARGGGLDIVGQRLAKVAESCGVPFEFHSAAMSGCEVHLENLGIRPGEAVGVNFPFVLHHMPDESVTLQNHRDRLMRLVKRLSPKVVTLVEQESNTNTSPFFQRFCETLDYYAAMFESIDVALPRDDKKRINAEQQCVARDIVNMIACEGIERVERHELLGKWRLRFSMAGFTPYPLSSSVTNAIKGVLEEYNDNYTLNERDGALYLGWKSRDMATSSAWR* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01249 544 MobiDBLite consensus disorder prediction 69 122 - -
Pte9g01249 544 ProSiteProfiles GRAS family profile. 165 544 IPR005202 -
Pte9g01249 544 Pfam GRAS domain family 174 544 IPR005202 -
Pte9g01249 544 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 112 537 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01249 Pte-Chr9 34062602 34067491 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01249 1 544 GRAS Transcription Factor Family AT4G17230 60.734 0.0 670
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte9g01249 GRAS 1.4e-125 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01249 - - qsa:O6P43_012018 811.986