Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01244 ATGGGGTTCAAGTTCAGTCCTAGAGTTGTTGGTCTTGTTTGCATCATGGTGATCTTACCTGCTGCACTGTGTACCTATGCTCCAGTCCCATTTACACCATCCAGAGCAGCCTTCTATGGTGATGGTTACGGGACTTCATCTGGAGCCTGCGGATATGGCAAAGATGGAAGCCAATTGAACAATGGGTCAGTGGCAACTTTATCTGGTAGGCTCTTTAAACAAGGAGCAGGCTGTGGTGCATGCTATCAGGTAAGGTGCAAGAACAAACAACTTTGCAGTAACTCTGGAGCAATTATTGTGGCCACTGACTCCGGTGAAGGCGACCGTACAGATTTCATTCTCAGCAAAATTGCCTACAAAAAATTGGGCAATAGTCCATATGCTTCAAAACAACTTTTTAAGTATGGCGTGGTTGATGTGGAATATAGAAGAGTTCGTTGTCAATACCCTGGCAGCAATATCGAGATTAAGATCAGTGAGCAGGCCAGATTTCCTGATTATTTAGCTCTTACTCTTCTATCTGTTGCTGGCAAAAACGACATAACTGCTGTTGAAGTGTTGGAGAGTGACAAGAAAACATGGAGGCCACTGCACAGAGCATATGGTGCAGTTTGGGATACACCTAATCCACCTTATGGCAAACTCTACGTAAGGTTTCAGGCTAATGGCGTTCGATATACCAAGGCAGTCAACCCTATTCCAAAGTACTGGAAGTCAGGAGTTTCATATGACAGTGGAGTTCAGCTTTATTAG 753 0.4436 MGFKFSPRVVGLVCIMVILPAALCTYAPVPFTPSRAAFYGDGYGTSSGACGYGKDGSQLNNGSVATLSGRLFKQGAGCGACYQVRCKNKQLCSNSGAIIVATDSGEGDRTDFILSKIAYKKLGNSPYASKQLFKYGVVDVEYRRVRCQYPGSNIEIKISEQARFPDYLALTLLSVAGKNDITAVEVLESDKKTWRPLHRAYGAVWDTPNPPYGKLYVRFQANGVRYTKAVNPIPKYWKSGVSYDSGVQLY* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01244 250 PRINTS Expansin/Lol pI family signature 135 151 IPR007118 GO:0005576
Pte9g01244 250 PRINTS Expansin/Lol pI family signature 30 45 IPR007118 GO:0005576
Pte9g01244 250 PRINTS Expansin/Lol pI family signature 68 86 IPR007118 GO:0005576
Pte9g01244 250 PRINTS Expansin/Lol pI family signature 194 208 IPR007118 GO:0005576
Pte9g01244 250 PRINTS Expansin/Lol pI family signature 231 245 IPR007118 GO:0005576
Pte9g01244 250 Gene3D - 148 246 IPR036749 -
Pte9g01244 250 SUPERFAMILY PHL pollen allergen 153 245 IPR036749 -
Pte9g01244 250 Gene3D - 23 147 IPR036908 -
Pte9g01244 250 PANTHER EXPANSIN-B3 31 248 - -
Pte9g01244 250 Pfam Lytic transglycolase 65 142 IPR009009 -
Pte9g01244 250 SUPERFAMILY Barwin-like endoglucanases 19 151 IPR036908 -
Pte9g01244 250 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 47 152 IPR007112 -
Pte9g01244 250 SMART dpbb_1 64 142 IPR007112 -
Pte9g01244 250 Pfam Expansin C-terminal domain 154 234 IPR007117 -
Pte9g01244 250 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 166 245 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01244 Pte-Chr9 34036672 34037957 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01244 3 249 Expansin Gene Family AT4G17030 45.635 6.44e-69 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01244 - - qsa:O6P43_034031 273.478