Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01243 ATGGACTCGAAATCGCCGGTCAGAGTCTCTTCAAAACAGCAGCATGAATCTGCTGTTGAAGAAAGGAAAAACCTTAGGCCTTCTCCACTTCAGATTTCACTTACAGGAAAGCTGAAGCCAGGATCTGCTGAGGATTTAACAAAATATATGCAAAGCTTATCGATGAAGACTGTCTTTGAAACCTCTGAAGATAAGTTACAAAATCCCAAGCTGAAGGGACATGGAAATTCTTCGCCTAATAAACTCGATTCAAATTTATCTTCATCAGTTCTTGAACAAGCACCTATAGAATGTGACTCTGCTGTAAATGACAGTGGATGCACCCTGGAAGGCTCTACTGATCTAGAAAAGAAGATATCGGAGTACTCAAGTGTGAAGAATAGTTCGGGTTCTGCCAAAGTAAGTGACGGTGCCAGCAGTCTTGCGAAGACTAGCGGAAGTGCCAAGATTAGTGAAAGGGCTGATTTCATGGACAGTGGGAAGAGTAGTATGTGCAGAGGAAGCACAAGCACTGATGTTAGTGATGAGAGCACTTGTAGTAGCTTTAGTAGCAGTATCAGCAAGCCTCATAAAGCAAATGACTTGAGATGGGAAGCCATCCAAGCTGTCAAAGTTAAAGATGGAGCTTTGGGTTTAGGTCATTTTAGGCTGTTAAGGATGTTGGGTTGTGGTGATATCGGGAGTGTCTACTTGTCAGAGTTAAGCGGAACAAAATGTTACTTTGCAATGAAAGTAATGGACAAGGGATCTCTAGCAAGTCGTAAAAAACTTCTTCGTGCTCAAACAGAAAGGGAAATATTGCAATCGCTGGACCATCCCTTCCTTCCAACATTGTACACTCACTTCGAGACAGAGAAGTTTTCCTGTTTGGTAATGGAATTCTGTCCTGGGGGAGATCTGCATACTCTAAGGCAGAGGCAGCCTGGAAAATATTTTCCTGAGCAGGCAGTAAAATTCTATGTTGCAGAGGTCCTACTTGCTTTGGAATATCTACACATGCTAGGGATTGTCTATCGTGATCTTAAGCCAGAAAATGTCCTTGTAAGAGATGACGGACATATAATGCTCTCTGACTTTGATCTCTCCCTCCGTTGTGCTGTCAGCCCAACACTTGTCAAAGGTTCATCTATAGAATCTGAACCCTTGAAAAAGAATCCTGTTTATTGTGTCCAGCCTGCTTGCATTGAGCCTTCCTGTATCCAACCATCATGTGTAGCTCCTACAACATGTTTTTCACCCCGACTATTCTCGAGTAAGTCAAAGAAGGATCGAAAGCCTAAAAATGAAATCGGCAACCAAGTTACTCCTTTACCGGAGCTCATTGCCGAGCCAACAGATGCTAGGTCTATGTCATTTGTTGGGACTCATGAGTACCTTGCCCCTGAGATAATCAAAGGTGAAGGCCACGGTAGTGCTGTTGACTGGTGGACATTTGGGATCTTTCTATACGAGCTATTGTTTGGAAAAACTCCTTTTAAGGGTTCTGGTAATCGTGCTACATTGTTTAACGTTGTTGGTCAGCCTCTCCGATTTCCTGAATCCCCAGTTGTCAGTTTTGCAGCAAGAGATCTTATAAGAGGGCTCCTTGTAAAGGAACCACAGCATAGATTGGCATATAAACGAGGTGCCACTGAAATAAAGCAACACCCTTTCTTTGAAGGCGTAAACTGGGCATTAATCCGGTGTGCTACTCCACCGGAAGTCCCAAAACCTATGGAGATTGAAAGAATCCCTGCTCCCCCCTCATCTACCAATGAGAAGTGCGTTAATTACCATTCTGCCCCAGTTCACAAAGGTTCTGATAATTATCTTGAATTTGATTTCTTCTAA 1830 0.4311 MDSKSPVRVSSKQQHESAVEERKNLRPSPLQISLTGKLKPGSAEDLTKYMQSLSMKTVFETSEDKLQNPKLKGHGNSSPNKLDSNLSSSVLEQAPIECDSAVNDSGCTLEGSTDLEKKISEYSSVKNSSGSAKVSDGASSLAKTSGSAKISERADFMDSGKSSMCRGSTSTDVSDESTCSSFSSSISKPHKANDLRWEAIQAVKVKDGALGLGHFRLLRMLGCGDIGSVYLSELSGTKCYFAMKVMDKGSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQRQPGKYFPEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVKGSSIESEPLKKNPVYCVQPACIEPSCIQPSCVAPTTCFSPRLFSSKSKKDRKPKNEIGNQVTPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEVPKPMEIERIPAPPSSTNEKCVNYHSAPVHKGSDNYLEFDFF* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01243 609 FunFam Serine/threonine-protein kinase AGC1-7 445 570 - -
Pte9g01243 609 CDD STKc_phototropin_like 214 571 - -
Pte9g01243 609 FunFam serine/threonine-protein kinase D6PK-like 299 366 - -
Pte9g01243 609 MobiDBLite consensus disorder prediction 1 43 - -
Pte9g01243 609 MobiDBLite consensus disorder prediction 60 86 - -
Pte9g01243 609 SUPERFAMILY Protein kinase-like (PK-like) 192 584 IPR011009 -
Pte9g01243 609 MobiDBLite consensus disorder prediction 71 86 - -
Pte9g01243 609 Gene3D Phosphorylase Kinase; domain 1 213 298 - -
Pte9g01243 609 Gene3D Transferase(Phosphotransferase) domain 1 299 366 - -
Pte9g01243 609 PANTHER FLIPPASE KINASE 1-RELATED 46 575 - -
Pte9g01243 609 FunFam Serine/threonine-protein kinase D6PK-like 213 298 - -
Pte9g01243 609 Gene3D Transferase(Phosphotransferase) domain 1 446 570 - -
Pte9g01243 609 Pfam Protein kinase domain 216 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte9g01243 609 Pfam Protein kinase domain 449 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte9g01243 609 ProSitePatterns Serine/Threonine protein kinases active-site signature. 336 348 IPR008271 GO:0004672|GO:0006468
Pte9g01243 609 ProSiteProfiles Protein kinase domain profile. 215 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte9g01243 609 SMART serkin_6 215 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01243 Pte-Chr9 34029683 34032860 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01243 116 610 AGC Kinase Gene Family AT5G47750 84.105 0.0 857
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pte9g01243 Pkinase 4.3e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01243 K08286 - cave:132168831 969.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g01243 9 34029683 34032860 Pte9g01243 9 34029683 34032860 RCT