Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01226 ATGTCTGAAAGAAACGGTTATTTTGTGAACTGGGAGGAGCAGATTATATGTCGAGACAAAGGGCGTCGCGTAATTCATTTTTATTTGAAAGATGAGTCTGGAAATTCAGTGCTTGCTGTTATAGGGACTGAGAGAAGCATAAGGCATATGTTGTATGTGGTTCCGAATGAGTTTTTGAGAGTTTATGGAAACAAAGAATCAATCAAAGTTTTTAAATGGCGAGCAAGAAGGGAGGTAGTGGTGTGGCTTCAATCTTTGGTATCTAAGCATAGACAATTACTTTCCTTTGCCTCAAAGCTACAACTGAATGATTCAAAGCAAACTCTAAAATCTTCTGAAATTTTAACTGATGCTGATCAGACTCATTTATCTGATCGATTGAGGAGATTGAAATTCAGAAGTTCAGATACTAAATGGTCTGGTGTTGCTTGGTCATGTGCGGAGCAGCTTAAGCACTATTCAGCCTTTTGTAGAAATGCAATAGTTATAACTGTTCATTCTTTTGTCCATACATTGGCTGAAGAAGAAAGTCATAACCTTGGGTATATTGAAGATATGTATGAAAATCAGGAAGGACTGAAAATGGTAAAAGTTCGCTGGTTCCTCCAGTGTCAGGAAGTTAAGGGTGTGATTCCAAAACTGAATCCACACCCCAGAGAAGTATTCATCACACCTCATGTTCAGGTTATCAGTGTTGAGTGTATTGATGGTCCTGCAATAGTTTTGACACCTAAGCATTATGAGAAATGCTTGACTGCTTCCCCGTGTTCCTCTTTTTCTGGAGCTTTCATCTGCTCAAAGCTGTTAGAGGATGACAAACTCAAGCCATTTGCACTTTCAAAGTTGCATGGGTATTTTAATCAAACCATCCTCTCCTGTTTAGATGGTTCTACGCCTTTCAGTGAGAAGAAGTGCCCTAAGTATCTTGGGGAAGATGAAGAATATTTCACTCAAGATGATCCAATAAAATCTGTTGGCATGAGGACTAGAAGTTGTTTTCCGGGATTGAAAAATGAGGATTCTGATCAACAAGCTTCCATACATGTGGAACAGATTGCCGGTGGCAGACATATGTATCCTAAGTTGAAATTAAAGCTTTCCAGGAAAAAACAAGGTGTCGAATTTATTGGAACGCAGCCCCAAGTTGATCTGTCATTTAAGGTTGATGACAAAATAGAGCTTCTTTGTCAAGATAGTGGCATTAGAGGATGTTGGTTTAGGTGTAAAATCTTGTCTATATCCAAGAAGCTGCTGAAAGTTCAATATGAAGATGTGGAAGATGTAGAGGGAGAGGGCAAGTTAGAGGAATGGGTCCCTGGATTTAGAGTCGCAGCTCCTGATAAACTGGGAACCAGATGTTTGGGTCGCCTGAGAATACGACCATTTCCACCAGAAGATTCTACTAACAGAAGCAGTTTTGAGATTGGAGCGGCAGTTGATGCATGGTGGAGTGATGGATGGTGGGAAGGAGTTATAACTGGAATTAATGTTTCAGGAATGGACACCCTGCAAGTGTATTCCCCAGGTGAAGACAAGTTGCTGGTAGTGAAGAGGAAGGATGTGAGGACTTCCCGAGATTGGGACGGCAACAGATGGGTCAATGTTATGATGAAGCCTGATATTCTGACTTGGTTGCCATCATGTGACCGTTTAAACACAAAACGGTCAGCACCTGCAGTGGGGAATGAATCCACTACCTGTGGTTCTGCAGTTTCAGATGACATTCAATATGACGAGGCTGAGTTATATGATGTTGATGTTTCAGATGACCTTGAAAGTATGAAGTGGTTCAAGTTTAGGAACCTGCTTCCCATCATTGAAGAAGATAAAGATACTGATGGCAATAGTGTTAGTACTTTGACATAG 1866 0.4073 MSERNGYFVNWEEQIICRDKGRRVIHFYLKDESGNSVLAVIGTERSIRHMLYVVPNEFLRVYGNKESIKVFKWRARREVVVWLQSLVSKHRQLLSFASKLQLNDSKQTLKSSEILTDADQTHLSDRLRRLKFRSSDTKWSGVAWSCAEQLKHYSAFCRNAIVITVHSFVHTLAEEESHNLGYIEDMYENQEGLKMVKVRWFLQCQEVKGVIPKLNPHPREVFITPHVQVISVECIDGPAIVLTPKHYEKCLTASPCSSFSGAFICSKLLEDDKLKPFALSKLHGYFNQTILSCLDGSTPFSEKKCPKYLGEDEEYFTQDDPIKSVGMRTRSCFPGLKNEDSDQQASIHVEQIAGGRHMYPKLKLKLSRKKQGVEFIGTQPQVDLSFKVDDKIELLCQDSGIRGCWFRCKILSISKKLLKVQYEDVEDVEGEGKLEEWVPGFRVAAPDKLGTRCLGRLRIRPFPPEDSTNRSSFEIGAAVDAWWSDGWWEGVITGINVSGMDTLQVYSPGEDKLLVVKRKDVRTSRDWDGNRWVNVMMKPDILTWLPSCDRLNTKRSAPAVGNESTTCGSAVSDDIQYDEAELYDVDVSDDLESMKWFKFRNLLPIIEEDKDTDGNSVSTLT* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01226 621 SMART agenet_At_2 471 529 IPR014002 -
Pte9g01226 621 SMART agenet_At_2 384 449 IPR014002 -
Pte9g01226 621 ProSiteProfiles BAH domain profile. 161 280 IPR001025 GO:0003682
Pte9g01226 621 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 384 546 - -
Pte9g01226 621 Pfam BAH domain 175 268 IPR001025 GO:0003682
Pte9g01226 621 Pfam Agenet domain 389 464 IPR008395 -
Pte9g01226 621 SMART BAH_4 161 280 IPR001025 GO:0003682
Pte9g01226 621 CDD Tudor_Agenet_AtDUF_rpt1_3 386 464 - -
Pte9g01226 621 Gene3D - 129 293 IPR043151 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01226 Pte-Chr9 33925985 33930084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01226 398 528 PHD Transcription Factor Family AT5G58610 26.119 2.52e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01226 - - qsa:O6P43_031360 655.21