Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01215 ATGAACAACCGGTACGTTGTTCCAACGGAGTTGCTGTGTAATTCAAGCAGCATGGATTTGCTCTCTTCAAATTCTTCATCAGGAGAACACCGCCTAATCGTTGGTGGAAGAAGCAGGTCTGCTGTCGCTACAACACAGACATCTTTTTTAGTCAGAATGGCCATGAGAATATCAAGAGCAAGGTGGTTTACTTTTTTAAGAAGAGTATTTCATTATCAGAATGGATCAAGGTCTGATCTTGGGTCTAACCCTTTCAATTCAAGCACTTGGATGGCCATGGAGCTTATTGCTTTGATGGCTCAAATAACCATCATGACATTCACTCTGGCTGTTTCAAAGAGGGAAAAACCAATTTGGCCTATGAGAATTTGGATAGTGGGGTATGACATAGGCTGTGTTCTTAATCTGTTGCTACTCTATGGACGCCACCATAGTCTACATCTTAGTCAAGGTGATGGGATTGGCTTTTCTGACGTTGAACAACAGAGGAGCAGTCAAGAATCCAGGATCACACATTTGATGAACAAATGCCGCACTTCACTGGAGCTTTTCTTTGCAATATGGTTTGTGATGGGTAATGTCTGGGTGTTCGACTCTCGATTTGGTTCTTTTGATCAAGCTCCAAAGCTTCATGTGCTATGTGTATCCTTGCTTGCTTGGAATGCTATCAGCTATTCTTTCCCATTCCTACTGTTTCTGCTGCTGTGCTGCTGTGTACCACTGATAAGTAGCCTCCTTGGATACAACATGAACATGGGGTCCACTGAAAAAGGCGCATCTGATGATCAGATTTTGCAGCTTCCAAGTTGGAGATATAAAGAAATTGACTCAAGATTGGAACTTGGCAAGGACATTGGGAATAATGAAGGTCATGAAAATGAAGATCCAGAATGCTGTATTTGCTTGGCCAAGTATAAGGACAAGGACGAAGTAAGACAATTGCCATGTTCCCATATATTTCATCTCAAGTGTGTGGATCAGTGGCTTAGAATTTTATCATGCTGCCCTCTCTGCAAACAAGAAATAGAGAGGTAG 1035 0.4213 MNNRYVVPTELLCNSSSMDLLSSNSSSGEHRLIVGGRSRSAVATTQTSFLVRMAMRISRARWFTFLRRVFHYQNGSRSDLGSNPFNSSTWMAMELIALMAQITIMTFTLAVSKREKPIWPMRIWIVGYDIGCVLNLLLLYGRHHSLHLSQGDGIGFSDVEQQRSSQESRITHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFDQAPKLHVLCVSLLAWNAISYSFPFLLFLLLCCCVPLISSLLGYNMNMGSTEKGASDDQILQLPSWRYKEIDSRLELGKDIGNNEGHENEDPECCICLAKYKDKDEVRQLPCSHIFHLKCVDQWLRILSCCPLCKQEIER* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01215 344 ProSiteProfiles Zinc finger RING-type profile. 298 339 IPR001841 -
Pte9g01215 344 Pfam Ring finger domain 297 339 IPR001841 -
Pte9g01215 344 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 247 343 IPR013083 -
Pte9g01215 344 SMART ring_2 298 338 IPR001841 -
Pte9g01215 344 SUPERFAMILY RING/U-box 290 342 - -
Pte9g01215 344 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 23 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01215 Pte-Chr9 33851931 33854629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01215 49 342 C3H Transcription Factor Family AT4G26580 70.270 8.88e-152 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01215 - - qsu:112039218 538.88