Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01212 ATGGAAGTCAAAAGAGAGGATGAGATTGAAGACATGTCATTGTCACCATCAAGAATGGGATCCATGCATATTGCAGGCAGTAATAGTTTTGGTCACAACATAGAATTCGTGCCTCAAGCATACCTGAGAAATAGATACTCAGAGATTGACATAGAAGTTGCGAATTTCACTACTAGTAAGGATTCTCCTCTCCCCATATTTCTCAAGTTTGAAGATGTGGAGTTCAAGGTTAGGAATAGCAGAGCTCACTCCAACAATCCAGTGAAGGAAATAGTGACAAAAGTTGCTACACGACTTAACATGGATGAGGATAAGTATAAGAAGATATTGAAGGGTATAACAGGAAGCATTGGCCCTGGGGAAATACTTGCATTGATGGGTCCTTCTGGTAGTGGGAAGACAACTTTGCTGAAAGTGATAGGAGGAAGACTGCTGGACAACGTCAAAGGGAAAGTAACATACAATGACATTCCCTATAATCCTGCTGTTAAGAGAAGGATTGGATTTGTCGCACAAGAAGACGTGCTCTTCCCACAGTTGACAGTTGAAGAAACACTGCTCTTTTCTGCTTATCTAAGGTTACCAAAGAACATAAGCAGGCAGCAGAAATATGATAGGGTAGAAAAAATCTTGAAGGATCTAGGCCTAGAAAGATGTCGAAACACTCGAGTAGGTGGAGGATATATCAAAGGCATATCAGGAGGTGAAAGGAAGAGAACAAGTGTAGGTTATGAAATTCTAGTTGATCCTTCATTACTGTTACTTGATGAACCAACTTCAGGCCTTGATTCCAATTCAGCACACAGACTTCTCCTCATTCTTCAGGGTCTTGCGAAGGCTGGAAGAACAATAATTACAACAATTCACCAACCTTCAAGCAGAATCTTTCACACATTTGACAAGCTTCTCTTGATATCAGAAGGCTGCCCAGTGTACTATGGAAAGGCTAGAGAATCAATGGACTACTTTGCTTCTTTGAGATTTATTCCTGAAATATCTATGAATCCTGCAGAGTTCTTGCTCGATTTGGCTACTGGACAAGTGAATGACATAACTGTTCCTGAAGATTTGGTACAAGCTCAAGTGTCTACTGACCCTGAGAAGGCTATCGTTGAATATATCCAACTCAAATACAAAACTCTTCTGGAGCCGAAAGAGAGAGAAAATCACCAAGCAACAAAGATACCAGAACATCTTCAAGCAGCCATTCAAATGAAGAAGGACTGGACTTTGTCTTGGATTGAACAATTCATGATTGTATCGAAGAGAACATTCACAGAAAGGTCCAGGGACTATTTTGATAAACTGAGACTAGTTCAGTCACTTGGAATTGCAGTACTATTGGGGCTTCTATGGTGGAAATCTTCTACAAATTCTGAAGCTCAACTCAGAGATCAAGTTGGTTTGATGTTCTACATATGTATATTCTGGACATCGTCATCCATTTTCGGTGCGGTTTATGTTTTCCCCTTCGAACAATACTACTTGGTGAAAGAAAGAAAGGCAGATATGTACAGATTAAGCGTATACTACGTGTGCAGCACACTCTGTGATATGGTTGCACATGTTTTCTATCCTACCATGTTCATGTTTGTAGTGTACTTCATGGCTGGCTTTAAAAGGACTGTTACTTGCTTCTTGCTGACATTGTTTGCCATCTTGTTAATCGCGATTACCAGTCAAGGTGCTGGAGAGCTATTTGGAGCAGCAGTTATGAGTATTCAACGGGCCGGGATGGTTGCTTCATTGATACTTATGCTCTTTCTCCTCACAGGGGGCTACTATGTGCAGCACATACCAAAGTTCATGCGATGGTTGAAATATTTATCCTTCATGTTCTACGGTTTTAGACTTCTGCTAAAAGTGCAGTATTCAGGAGAGCAGTTATATGAATGTGAAAGCAAACATGGATGTATGCCTTTGCAGAGTTCACCATCTTTTGACACTGTCAACCTGAATGGTGGCTTGCAAGAAGTATGGATTCTACTTGCCATGGCTCTAGTCTACCGGTTAGGCGCTTACTTCTGTCTCCGAAGAAGAATTAGTCTCAGCAATGTTTGA 2061 0.409 MEVKREDEIEDMSLSPSRMGSMHIAGSNSFGHNIEFVPQAYLRNRYSEIDIEVANFTTSKDSPLPIFLKFEDVEFKVRNSRAHSNNPVKEIVTKVATRLNMDEDKYKKILKGITGSIGPGEILALMGPSGSGKTTLLKVIGGRLLDNVKGKVTYNDIPYNPAVKRRIGFVAQEDVLFPQLTVEETLLFSAYLRLPKNISRQQKYDRVEKILKDLGLERCRNTRVGGGYIKGISGGERKRTSVGYEILVDPSLLLLDEPTSGLDSNSAHRLLLILQGLAKAGRTIITTIHQPSSRIFHTFDKLLLISEGCPVYYGKARESMDYFASLRFIPEISMNPAEFLLDLATGQVNDITVPEDLVQAQVSTDPEKAIVEYIQLKYKTLLEPKERENHQATKIPEHLQAAIQMKKDWTLSWIEQFMIVSKRTFTERSRDYFDKLRLVQSLGIAVLLGLLWWKSSTNSEAQLRDQVGLMFYICIFWTSSSIFGAVYVFPFEQYYLVKERKADMYRLSVYYVCSTLCDMVAHVFYPTMFMFVVYFMAGFKRTVTCFLLTLFAILLIAITSQGAGELFGAAVMSIQRAGMVASLILMLFLLTGGYYVQHIPKFMRWLKYLSFMFYGFRLLLKVQYSGEQLYECESKHGCMPLQSSPSFDTVNLNGGLQEVWILLAMALVYRLGAYFCLRRRISLSNV* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01212 686 Pfam ABC transporter 110 260 IPR003439 GO:0005524
Pte9g01212 686 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 68 332 IPR003439 GO:0005524
Pte9g01212 686 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 55 671 - -
Pte9g01212 686 Pfam ABC-2 type transporter 415 624 IPR013525 GO:0016020|GO:0140359
Pte9g01212 686 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 324 IPR027417 -
Pte9g01212 686 FunFam ABC transporter G family member 22 97 326 - -
Pte9g01212 686 SMART AAA_5 119 317 IPR003593 GO:0016887
Pte9g01212 686 Gene3D - 93 326 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01212 Pte-Chr9 33837395 33840379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01212 108 293 Calmodulin-binding Proteins AT2G36910 29.592 6.23e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01212 K05681 - qsa:O6P43_013516 1156.35