Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01211 ATGCAAGGTCCAAACAAGAAGAGCACCAGTAGAGAATCTGGAAAACTCAGTCAGTTAAAGACAGCAAAAAGGAAAAAGCTATCAGTACAACTGAGGTCCAAAAAGAAAGGCAGAAAGTCTCCTGGGAGGCAAAGCGAGCAGAGTATAAAGCATCATAAAAAGGGAAATGGTGTAAAATTTTCAGATGAGGCAAAGAAAAAGTTAATAGGAAGTAAAAGACCGCATGAAAAACTTGATAAGAGATCTAATAAGAAGAAGCACCCCACAGTAATTGTTCAACATGAAAAATCCTCTTGTGTTCGACATGAGGTGAAACACGTAGATGGAAAGGTAAATTTGAATAAGCTACAGAATAGGAAGAGAAGGAAGAAAAAAAAATTAGGGAAAAAGGACAGTGTGGAGCTTGATGAGGCCTCACGTATGCAGAGGAGAGTTAGGTATCTATTAATTAAGATGAAGCTTGAGCAGAACCTTATTGATGCCTACTCTGCTGAAGGTTGGAAAGGTCAGAGCCGAGAAAAGATTAGGCCTGAAAAAGAACTCCAAAGAGCAAGGAAGCAGATATGGAAGTGTAAACTTGGACTGCGTGATGCAATTCGACAGTTGGATTCTCTAAGCAGAGTAGGAAGTATAGAGAACTCTGTCATAGCCCCAGATGGGTCTGTTTATCATGAGCATATATTCTGTGCAAAATGCAAGCGAAATGAAGCTTTCCCAGACAATGATATTATTCTTTGTGATGGAACCTGCAACTGTGCTTTCCACCAAAAGTGTCTTGATCCTCCTCTGGATACTGAACACATTCCTCCAGGTGATCAAGGTTGGTTTTGCAAATTTTGTGAGTCTAAGATGGAAATACTTGAGGCAATCAATGCTCATCTAGGGACTCACTTCTCAGTGAATAGTGCATGGCAGGATATTTTCAAGGAAGAAGCTGCATATCCTGATGGTAGCCATGCCTTATTCAATAGAGAGGAAGAATGGCCTTCAGATGATTCTGAAGATGATGACTATAATCCAGATAGGCGAGAAGGCAGCCATGGGATTGGTGTGGAAGGGTCTGAGGACTTAAGATCTGATGATGAAAGCAGTTCTACAAGCTTTTGGTCTTCAAATGATGAGTATCATTCAGGAACAGAAGACATTGCCCATCAAACTGTCTCTGTTGTTAGATGTGTAGAATCTGGTGATTCCACAGATGGAGAAATTCTAAATGGTCGGAGACAGAGAAGAGCTGTTGACTATAAGAAACTACATGATGAAATGTTTGGGAAGGATGTGCCGGGTCATGAACAAGTTAGTGAGGATGAAGACTGGGGTCCTAAGAAAAGAAAGAGAAAGCATTCTGATGCTGCCAGTACTCTAATGACTCTGTATGAGAGCAAGGATAAAAGTCCGGATGTGGAAATGTCAGATAGGAAAAACAAAACCTCAGACATGCAAATCAGGAGATCGTTTTTCAGAATTCCCCATGATGCTGTTGAGAAGCTACGACAAGTATTTCAAGAGAATCAACTTCCTCCTAGATCTGTTAAAGAAAGTCTTTCACTAGAACTGGGACTTGATTCAGAAAAGGTTAGCAAGTGGTTCAAAAATGCACGTTATTTAGCACTCAAAGCTGAGAAGAAGGAGGAACACACAATACATCTGAACAAATTTGTACCATCATCAAAGTCCAGAAATAATGAATTAGATCGTGTCAAGCAAAATGGCCCTGTGACATCGAAGGAGATTCCAGAAAAGACACTAACTCCTCTTCCAGAAAATAAAAAGGTTGGCAGAAAGCGATTGAAGTCCAGCCGAAGTCCTTTATCAAGGAGAGAGCAACACAGGTCATCAGAAAATGTTAATCAGGTTGGCAATGATCACAGCGATGATGTGAGCTTGAAGAAACTATTGAAAATGAAACACAGAGAAAAGAGGATCAGCTCCAGAGTAGACTCCAGGGCCGCAGAAATAGAATTTGAGAGACTTAGTGAAGCAAAGCATAGATTGCAACGCATGAAGCAGAAATTAACAGCAGCAGCTCGTGATAACAACACAGAGCGTTCTAATGATCATTTGAACCACCAACATGTGATTTTCGTACCAATAGCTGAGTTAAAGGAGAAAGTATGA 2118 0.4056 MQGPNKKSTSRESGKLSQLKTAKRKKLSVQLRSKKKGRKSPGRQSEQSIKHHKKGNGVKFSDEAKKKLIGSKRPHEKLDKRSNKKKHPTVIVQHEKSSCVRHEVKHVDGKVNLNKLQNRKRRKKKKLGKKDSVELDEASRMQRRVRYLLIKMKLEQNLIDAYSAEGWKGQSREKIRPEKELQRARKQIWKCKLGLRDAIRQLDSLSRVGSIENSVIAPDGSVYHEHIFCAKCKRNEAFPDNDIILCDGTCNCAFHQKCLDPPLDTEHIPPGDQGWFCKFCESKMEILEAINAHLGTHFSVNSAWQDIFKEEAAYPDGSHALFNREEEWPSDDSEDDDYNPDRREGSHGIGVEGSEDLRSDDESSSTSFWSSNDEYHSGTEDIAHQTVSVVRCVESGDSTDGEILNGRRQRRAVDYKKLHDEMFGKDVPGHEQVSEDEDWGPKKRKRKHSDAASTLMTLYESKDKSPDVEMSDRKNKTSDMQIRRSFFRIPHDAVEKLRQVFQENQLPPRSVKESLSLELGLDSEKVSKWFKNARYLALKAEKKEEHTIHLNKFVPSSKSRNNELDRVKQNGPVTSKEIPEKTLTPLPENKKVGRKRLKSSRSPLSRREQHRSSENVNQVGNDHSDDVSLKKLLKMKHREKRISSRVDSRAAEIEFERLSEAKHRLQRMKQKLTAAARDNNTERSNDHLNHQHVIFVPIAELKEKV* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01211 705 MobiDBLite consensus disorder prediction 40 90 - -
Pte9g01211 705 MobiDBLite consensus disorder prediction 322 382 - -
Pte9g01211 705 MobiDBLite consensus disorder prediction 363 382 - -
Pte9g01211 705 MobiDBLite consensus disorder prediction 115 135 - -
Pte9g01211 705 Pfam PHD-finger 228 282 IPR019787 -
Pte9g01211 705 MobiDBLite consensus disorder prediction 339 362 - -
Pte9g01211 705 Pfam Homeodomain 491 535 IPR001356 GO:0003677
Pte9g01211 705 MobiDBLite consensus disorder prediction 551 627 - -
Pte9g01211 705 FunFam pathogenesis-related homeodomain protein-like 220 280 - -
Pte9g01211 705 FunFam pathogenesis-related homeodomain protein 482 546 - -
Pte9g01211 705 ProSiteProfiles 'Homeobox' domain profile. 480 540 IPR001356 GO:0003677
Pte9g01211 705 SUPERFAMILY FYVE/PHD zinc finger 220 285 IPR011011 -
Pte9g01211 705 CDD PHD_PRHA_like 228 280 IPR045876 -
Pte9g01211 705 SMART HOX_1 482 544 IPR001356 GO:0003677
Pte9g01211 705 MobiDBLite consensus disorder prediction 425 453 - -
Pte9g01211 705 Gene3D - 478 549 - -
Pte9g01211 705 MobiDBLite consensus disorder prediction 425 445 - -
Pte9g01211 705 Coils Coil 648 678 - -
Pte9g01211 705 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 212 292 IPR013083 -
Pte9g01211 705 CDD homeodomain 483 535 IPR001356 GO:0003677
Pte9g01211 705 SMART PHD_3 228 281 IPR001965 -
Pte9g01211 705 SUPERFAMILY Homeodomain-like 483 547 IPR009057 -
Pte9g01211 705 PANTHER POLYCOMB-LIKE TRANSCRIPTION FACTOR 12 704 - -
Pte9g01211 705 MobiDBLite consensus disorder prediction 1 90 - -
Pte9g01211 705 ProSitePatterns Zinc finger PHD-type signature. 229 280 IPR019786 -
Pte9g01211 705 MobiDBLite consensus disorder prediction 1 16 - -
Pte9g01211 705 MobiDBLite consensus disorder prediction 20 39 - -
Pte9g01211 705 ProSiteProfiles Zinc finger PHD-type profile. 226 283 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01211 Pte-Chr9 33829231 33835782 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01211 129 544 Homeobox Transcription Factor Family AT4G29940 58.588 2.40e-154 464
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-PHD Pte9g01211 PHD 9.6e-11 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01211 - - qsa:O6P43_022367 692.575