Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01194 ATGGCGGATTCTGACAATGATTCCGGAGGAGCACCGACCAATGCGACTAACGCGAGCGGCAACGAGCTATCACCACGTGAACAAGACAGGTTCTTGCCAATAGCAAACGTGAGCAGAATCATGAAGAAAGCATTGCCAGCGAACGCTAAGATCTCGAAGGACGCGAAGGAGACGGTGCAGGAGTGTGTCTCAGAGTTCATCAGTTTCATTACAGGGGAGGCTTCAGACAAGTGTCAAAGAGAGAAGAGGAAGACAATCAATGGGGATGACTTACTGTGGGCCATGACTACTTTGGGCTTTGAAGAATACGTGGATCCCTTGAAGATTTACTTGCAGAGGTTTAGAGAGATGGAAGGTGAGAAGACCGTGGCGGCGCGTGACAAAGAAAGTGGACCTCTAGGTAGCTCAACTAATGCCGGAGCTGGAAGTGCAGCTGTAGGGGTTGGTGTGGGTAGTGTAGGGAACAGTGGTTATGAAGGTGGTGGGGTGTATGCCAGTGGAATTGGGATGGGGATGATGATGCCTCATCAAGGACACGGGTACGGTGCAGGAGGGTTTCATCAGATGCCTGGGAGTGGTGGTAGTGGTGGTCCTGTCATGGGTAAGACGGGGCCTAGTTATCCAGATAGACCCAGATAG 639 0.5149 MADSDNDSGGAPTNATNASGNELSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVDPLKIYLQRFREMEGEKTVAARDKESGPLGSSTNAGAGSAAVGVGVGSVGNSGYEGGGVYASGIGMGMMMPHQGHGYGAGGFHQMPGSGGSGGPVMGKTGPSYPDRPR* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01194 212 MobiDBLite consensus disorder prediction 182 212 - -
Pte9g01194 212 PRINTS CCAAT-binding transcription factor subunit A signature 59 77 - -
Pte9g01194 212 PRINTS CCAAT-binding transcription factor subunit A signature 97 115 - -
Pte9g01194 212 PRINTS CCAAT-binding transcription factor subunit A signature 78 96 - -
Pte9g01194 212 MobiDBLite consensus disorder prediction 1 29 - -
Pte9g01194 212 MobiDBLite consensus disorder prediction 7 24 - -
Pte9g01194 212 FunFam Nuclear transcription factor Y subunit B-3 20 143 - -
Pte9g01194 212 Gene3D Histone, subunit A 20 140 IPR009072 GO:0046982
Pte9g01194 212 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 5 128 IPR027113 GO:0001228|GO:0006355|GO:0016602
Pte9g01194 212 ProSitePatterns NF-YB/HAP3 subunit signature. 62 78 IPR003956 GO:0005634|GO:0006355|GO:0043565
Pte9g01194 212 SUPERFAMILY Histone-fold 28 130 IPR009072 GO:0046982
Pte9g01194 212 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 31 95 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01194 Pte-Chr9 33669392 33671046 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01194 1 125 CCAAT-HAP3 Transcription Factor Family AT4G14540 83.200 9.88e-73 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Pte9g01194 CBFD_NFYB_HMF 2.1e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01194 K08065 - qsa:O6P43_013552 278.87