Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01188 ATGGCCATGAATGGGGCAAAGGATCCATTGCTGTCAGGACCAAAATATCCTACACCTCACAAGACCTGCAATAATCAAATGAAGGGTAGGTTTCGCCGCATGAAAAGTTGTCCTATTGTAGACACAGTTCAGCTGGATACAAAGGAAGTGAACCCAATACCAGCCGAATCTATATTTGGGAATGTACATCCAAGCTTGAGAAAAGTGGCTTTGCTCTTGGCTATCTATTTAGGTTCTGGAGCTGTATGCTTCTATCTTGTACGGCATCAAATCAAAGGGGTCAAGACAAATGGACTTCTTGATGCCATATATTTTTCTATCGTGACAATGACGACAGTTGGGTATGGAGACCTTGTGCCTAATAGTGATCTTACAAAGCTTCTTGCTTGTGCTTTTGTCTTTTTAGGAATGGCTTTGGTTGGCCTAATTCTAAGCAAAGCTTCAGATTACTTGGTAGATAAGCAAGAAGTTTTACTAGTTAAGGCCTTGCATATGCATCAAAAAATTGCTCCTAGTGAAATATTAAAGGAGATAGAGACCAACAAAGCAAAATATAAATTCTTTCTGTCCCTTTTCCTTCTTTTGGCTATCATTATCATGGGAACAGTTTTCTTAAACAAAGTTGAAAAATTGAGTGCTGTTGATGCTTTCTATTGTGTTTGCTCAACCATCACCACTCTTGGTTTTGGAGATAAAAGTTTCTCAACTGAAGTGGGAAGAGTTTTTGCTGTGTTTTGGATCCTACTGGGTACTATTTCTGTAGCTCAGTTCTTCCTTTACCTTGCTGAGATTAACACAGAAAAGAGACAAAAGGCAATAGTGCATCGGGTTCTTACAAGGAAGATGACCAATTTTGATTTGGAGGCAGCTGATATAGATGATGATGGCAGAGTTTGTTTAGCAGAATTTGTTGTTTATAAACTGAAAGAAATGGGGAAGATCAATGAAGAAGACATCCATCTTGTGATGGAGGAGTTCAAAGAACTTGATGTTGATCAATCTGGGACATTGTCTATGTCTGACTTAGCACTTGCTCAACCATAG 1044 0.3898 MAMNGAKDPLLSGPKYPTPHKTCNNQMKGRFRRMKSCPIVDTVQLDTKEVNPIPAESIFGNVHPSLRKVALLLAIYLGSGAVCFYLVRHQIKGVKTNGLLDAIYFSIVTMTTVGYGDLVPNSDLTKLLACAFVFLGMALVGLILSKASDYLVDKQEVLLVKALHMHQKIAPSEILKEIETNKAKYKFFLSLFLLLAIIIMGTVFLNKVEKLSAVDAFYCVCSTITTLGFGDKSFSTEVGRVFAVFWILLGTISVAQFFLYLAEINTEKRQKAIVHRVLTRKMTNFDLEAADIDDDGRVCLAEFVVYKLKEMGKINEEDIHLVMEEFKELDVDQSGTLSMSDLALAQP* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01188 347 Gene3D - 253 345 - -
Pte9g01188 347 Gene3D - 191 252 - -
Pte9g01188 347 SUPERFAMILY EF-hand 252 343 IPR011992 -
Pte9g01188 347 ProSitePatterns EF-hand calcium-binding domain. 330 342 IPR018247 -
Pte9g01188 347 FunFam Two-pore potassium channel 1 167 275 - -
Pte9g01188 347 FunFam Calcium-activated outward-rectifying potassium channel 1 63 158 - -
Pte9g01188 347 ProSiteProfiles EF-hand calcium-binding domain profile. 317 347 IPR002048 GO:0005509
Pte9g01188 347 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 71 319 IPR003280 GO:0005267|GO:0016020|GO:0071805
Pte9g01188 347 SUPERFAMILY Voltage-gated potassium channels 66 167 - -
Pte9g01188 347 SUPERFAMILY Voltage-gated potassium channels 179 283 - -
Pte9g01188 347 ProSitePatterns EF-hand calcium-binding domain. 291 303 IPR018247 -
Pte9g01188 347 PRINTS Two pore domain K+ channel signature 108 136 IPR003280 GO:0005267|GO:0016020|GO:0071805
Pte9g01188 347 PRINTS Two pore domain K+ channel signature 225 234 IPR003280 GO:0005267|GO:0016020|GO:0071805
Pte9g01188 347 Pfam Ion channel 193 265 IPR013099 -
Pte9g01188 347 Pfam Ion channel 72 151 IPR013099 -
Pte9g01188 347 Gene3D - 63 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01188 Pte-Chr9 33639603 33641619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01188 37 346 Ion Channels AT5G55630 59.807 6.41e-137 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01188 K05389 - cave:132176351 454.907