Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01187 ATGCTTGTCACTTCTGTTGGCATGAACACAACATGGGGTGAGATGATGAGTTCAATCAGCAAAGACACCAATGAGCTGACACCATTGCAAGAAAGGCTAAACAAGCTAACATCCTCCATTGGAAAGGTTGGTTTAGCTGTGGCTTTTCTTGTTCTTGTCGTCCTTTCGGTTCGTTACTTCACTGGGAATATAAAAGATGATAATGGCAACAGGAATTCAATGGGAGGAAGACTAACTGCAGCAGTAACTATCATGATTGAGGTAATTTCTGTCACTCTCACACTTGCTTACTCCATGAAGAGAATGATGGCGGATCAAGCAATGGTGCGAAAGGTTTCAGCTTGTGAAACCATGGGATCTGCGACCATTGTATGCACTGACAAGACAGTCCCAAGATTGCAGATTTATTCTTCCTCAAGCTATCTAGAGTGA 432 0.4282 MLVTSVGMNTTWGEMMSSISKDTNELTPLQERLNKLTSSIGKVGLAVAFLVLVVLSVRYFTGNIKDDNGNRNSMGGRLTAAVTIMIEVISVTLTLAYSMKRMMADQAMVRKVSACETMGSATIVCTDKTVPRLQIYSSSSYLE* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01187 143 Gene3D - 1 132 - -
Pte9g01187 143 SUPERFAMILY Calcium ATPase, transmembrane domain M 20 120 IPR023298 -
Pte9g01187 143 Pfam E1-E2 ATPase 2 110 - -
Pte9g01187 143 PANTHER CATION TRANSPORTING ATPASE 1 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01187 Pte-Chr9 33627651 33628197 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01187 1 129 Primary Pumps ATPases AT3G22910 63.758 3.84e-44 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01187 K01537 - qsu:111993920 180.259