Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01181 ATGCAAGCTGCTTCACCCCCAGGCTGTTTACCACGGACTAAATTAACTGATGCTAAGGGACACCGTCTCAGTTTTGTGAAAGGACTTAACTCAGATATTGTTTGGTCTGGCGTTGGATGGTCATGTGGGAAACAACTCAAGCATTATCCAGCTTTTAGCAGAAACGGAACTGTGATAGCAATTCAGTCCTTTGTCTATGTCATGGCCAAAGGAGACAGTCACTACGTTGCATATTTGGAAGATATGTATGAAGACAGAAGGGGTCAGAAAAAGGTCAAAGTAAGATGGTTTCATCATGTTCAGGAAGTTAAAGGTGTAATTCCTATAAGGAATCCTCACCCTCGAGAAGTGTTTATTACACCTTACTCACAAGTGATTAGTGCAGAGTGCGTGGATGGTCTTACCTCAGTTTTAACCCGGGAGCATTATGAAAAATGCTCGCCCACTATTTCTCCTGCCTCATTGGACAGAATTCATTTGTGTTTTAGGCAGTTCAGAAGCAATAGATTGAAGCCTTTTGACATTACTAAGCTGGGTGGCTACTTTGAGCAACCAATTCTTTTAGCTCTTGATGGTTCCCTAAAGCATGATTATGTTCACTACAGTGTGACTGCAGAAGATAGTGAAGATCTGAACGCTGGTGACAGTCTAAAGCTGGGAGCAAAAAGAACCAGGAGCGATAGGGGATCTCCAAGGTGTTGGATAGGTCATCAGGGTGTCAGGAAGTTAAGTAGAGTTAATAGGATGACAACATATGGAACCTATCAGGATATAAGATATATGGAGCCCAGTGGGAAATTTTTTGCTCTAAAGCAGGTTGAGAATCAAGCTTGGTGTAATTCCTACAAGGTTGATGAAAAAATTGAGTTGCTCTGCCAAGATAGTGGCATCCGTGGCTGTTGGTTCCGGTGTACAATTCTGCAGGTAACAAGAAAACATTTGAAAGTTCAATATGATGATTTACAGGATGAAGAAGGTTCTGGAAACCTTGAGGAGTGGGTTCCTGCTTTGAAGCAGGCCTTGCCTGACAAACTTGGCATGAGAAACTCAGCCCGCCTGACAATCCGTCCAAGCTCGTCATTGGAGGATAAAGGAGAACTAGCTCTTCAGGTGGGAGCTGCGGTTGATGCATGGTGGAGTGATGGCTGGTGGGAAGGGGTTGTAACTGAAGTTACTGACTGTTCTGATGTTATACAAGTTTATTTTCCTGGTATGTTATGA 1221 0.4324 MQAASPPGCLPRTKLTDAKGHRLSFVKGLNSDIVWSGVGWSCGKQLKHYPAFSRNGTVIAIQSFVYVMAKGDSHYVAYLEDMYEDRRGQKKVKVRWFHHVQEVKGVIPIRNPHPREVFITPYSQVISAECVDGLTSVLTREHYEKCSPTISPASLDRIHLCFRQFRSNRLKPFDITKLGGYFEQPILLALDGSLKHDYVHYSVTAEDSEDLNAGDSLKLGAKRTRSDRGSPRCWIGHQGVRKLSRVNRMTTYGTYQDIRYMEPSGKFFALKQVENQAWCNSYKVDEKIELLCQDSGIRGCWFRCTILQVTRKHLKVQYDDLQDEEGSGNLEEWVPALKQALPDKLGMRNSARLTIRPSSSLEDKGELALQVGAAVDAWWSDGWWEGVVTEVTDCSDVIQVYFPGML* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01181 406 Pfam Agenet domain 286 357 IPR008395 -
Pte9g01181 406 CDD Tudor_Agenet_AtDUF_rpt1_3 282 336 - -
Pte9g01181 406 Gene3D - 27 173 IPR043151 -
Pte9g01181 406 Pfam BAH domain 60 169 IPR001025 GO:0003682
Pte9g01181 406 ProSiteProfiles BAH domain profile. 57 176 IPR001025 GO:0003682
Pte9g01181 406 SMART BAH_4 57 176 IPR001025 GO:0003682
Pte9g01181 406 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 280 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01181 Pte-Chr9 33432475 33434784 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01181 279 405 PHD Transcription Factor Family AT5G58610 28.986 1.46e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01181 - - gmx:100306240 540.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g01181 9 33432475 33434784 Pte9g01181 9 33432475 33434784 RCT