Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01179 ATGGGTTTGTATGTTTTCAGTGTCTTGATCGTGGTGTTGTTTGTTTGCTTGAATTGGGTTAGTGAGTTTTCAGCAGAAGGTGCTACTGCTAATGCCTATGCTAGGAACTATATTAGTTGGGATGATTTGAGAGTTGATGAACAAAAAGTAAGTTTCAACTCAAGAGCTGAGAATGGGATTGATAAGATCATTGTGGTTGACAAGAACGGTGATGGGAATTCTGTTACCATTCAAGGTGCTATTGACATGGTTCCAAAATTCAACACGCAGAGAGTGAAGATTTACATTCGTCCAGGACTTTACAGGGAAAAGATACATGTTCCAAGTGCCAAGCCATATGTTTCATTCATTGGTAATGAAAATGATGGTTCTAGAACTGTAATTTCATGGAACAGTAAGGCATCAGATAAAGACCCAAATGGAGGTGAAGTTGGCACGTACAGATCAGCTACAGTAACCGTAGAATCAGACTATTTCTGTGCCACTGGGATCACATTTGAAAATACTGTTGTTGCAGTGCCTGGTGGACATGGAATGCAAGCAGTTGCACTAAGGATAGCTGGTGATAAAGCAGTGTTCTACCAAATTAGAATCTTGGGGACACAGGATACTCTTTTAGACGACAAAGGAACTCACTACTTCTACAGATGTCACATTCAAGGAAGTGTTGACTTTATATTTGGCAGTTCGAAGTCACTCTTTCAGGACTGCGTTATTCAATCAACAGCTCAGAACTTCGGAGCCATTGCAGCTCACCATAGGGATTCACCTTACGAAGATACAGGATTTTCATTTGTGAACTGCACAATTCAAGGATCTGGCAGTGTCTTCCTAGGAAGAGCTTGGGGGGACTATTCAAGAGTAATATACTCTCTTTGTGACATGCAGAACATTATAGCTCCTGCAGGCTGGAGTGATTGGAATCACCCTTTGAGACAGAAGACTGTAGTTTTTGGGGAGTACCAGTGTAAAGGTGGAGGAGCAAATTCAAGAGACAGAGTTCCATGGTCGAAGATTTTCAATTACGAAGAAGTGAAGCAATTTCTGGATAAGCAATATATAAATGGCGATCAATGGCTTAGACTATGA 1089 0.4096 MGLYVFSVLIVVLFVCLNWVSEFSAEGATANAYARNYISWDDLRVDEQKVSFNSRAENGIDKIIVVDKNGDGNSVTIQGAIDMVPKFNTQRVKIYIRPGLYREKIHVPSAKPYVSFIGNENDGSRTVISWNSKASDKDPNGGEVGTYRSATVTVESDYFCATGITFENTVVAVPGGHGMQAVALRIAGDKAVFYQIRILGTQDTLLDDKGTHYFYRCHIQGSVDFIFGSSKSLFQDCVIQSTAQNFGAIAAHHRDSPYEDTGFSFVNCTIQGSGSVFLGRAWGDYSRVIYSLCDMQNIIAPAGWSDWNHPLRQKTVVFGEYQCKGGGANSRDRVPWSKIFNYEEVKQFLDKQYINGDQWLRL* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01179 362 Pfam Pectinesterase 64 357 IPR000070 GO:0030599|GO:0042545
Pte9g01179 362 SUPERFAMILY Pectin lyase-like 61 360 IPR011050 -
Pte9g01179 362 Gene3D - 58 362 IPR012334 -
Pte9g01179 362 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 58 361 - -
Pte9g01179 362 ProSitePatterns Pectinesterase signature 2. 219 228 IPR033131 -
Pte9g01179 362 FunFam Pectinesterase 60 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01179 Pte-Chr9 33429406 33431148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01179 4 314 Carbohydrate Esterase AT5G55590 57.927 1.63e-135 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01179 K01051 - qsa:O6P43_013577 555.444