Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01176 ATGCAAGCATCTCAGAAACATAACATGTTACGTGGATCCGAGAGGTTCTACAAGAAACCTCTGCAAAATCCATGTTCCTATAGCCAGCCTCCCAATGAGAATCTTGGAGACAGTTCAGTTTCCGATGACAACAGTCAAAAAAATCACTTGTCACTTCAGACGTTTGGGCAGCACTGCACACTAGAGTCATCCACCACGACGAGTGGCTATGCTGTTCATAGTTCTTCTACAGAAAGTTTCTCACCTAGTGGCGGCACATCAACAAAACCAGATCCATCACATGCGTCAAAGCTTCATCGTTCACCTGACAACAGAATTGGCTCCCCAGATAGCCTGTCATGCTTGACACATGATGTTGGTGAATTAAGGCACAAGATAAGAGAGTTGGAAACAGTTATGCTAGGACCTGAGGATGACATAATTGACGCATATTACGATTCTGTAAATCCTGGTCTATCTGATCCCATGCCATCACCTGCAGAAAAGTGGAACCAGCTTATGGAGATGATATCCAAAGGAGATTTAAAAGAAATGCTTCGTGCGTGTGCAAAAGCATTGGCAGATAATGATGTAGAGACAGTTGAATTGCTAGTGCCAGAGATACGAGGGATGGTCTCGGTTTACGGTGAGCCAATCCAAAGATTAGGAGCATATATGTTGGAAGGCCTAGTCGCAAGGCTGGCCTCTTCTGGAAGCTCCATTTACAAATCACTGAGATGCAAAGAACCTGCTGGCGCTGAACTTCTTTCATACATGCATTTACTCTATGAAATCTGTCCGTACTTCAAGTTTGGCTATATGTCTGCAAATGGGGCAATTGCTGAGGCCATGAAAGATGAAAGCAGAATCCACATAATTGATTTTCAAATTGCTCAAGGCAGTCAATGGTTCTCTCTGATCCCAGCTCTAGCGAGTAGGCCTGGAGGACCCCCTAGGATAAGAATAACAGGCGTCGATGACTCTGTTTCGACATATGCCCGTGGTGGCGGACTTGAAGCTGTGGGACTCAGGTTATCCAGGCTGGCAGAGACATGCAAGGTACCTTTTGAGTTCCATGCAGCTGGACTTGATGGTTCTGTTGTGAGACTGGAAGACCTTGGCATCCAATTTGGTGAATCAATTGCTGTGAATTTCGCCTTAATGCTACACCACATGCCAGATGAGAGTGTGAGCGTCCATAATCATCGTGATAGATTGATACGATTGGCAAGGTGCTTGTCTCCTAAGGTTGTGACCCTTGTTGAACAGGAGTCCAACACCAATACTGCTCCTTTTCTCCCACGTTTTATCGAGACACTCGACTACTACAGCGCGGTTTTCGAGTCCATTGATGTTACTAATTTCCCAAGGGACCACAAGGAGAGGATTAACGTGGAACAGCACTGTCTGGCCAGAGAGATTGTGAACTTAATAGCATGTGAAGGAGCTGAGAGAGTGGAACGTCATGAGCTTGTCAGTAAATGGAGGTCTAGATTCGCAATGGCTGGATTTACACCATATCCCCTGAGCTCTTTCGTCAATGCTACCATAAAGAATCTGCTGAAGAATTACAGTGATAAATACACGTTGGAAGAGAGAAATGATGCTCTATACCTTGGCTGGATGAGTCGTCCTCTTGTTAGTTCTTGTGCTTGGAGGTGA 1641 0.4528 MQASQKHNMLRGSERFYKKPLQNPCSYSQPPNENLGDSSVSDDNSQKNHLSLQTFGQHCTLESSTTTSGYAVHSSSTESFSPSGGTSTKPDPSHASKLHRSPDNRIGSPDSLSCLTHDVGELRHKIRELETVMLGPEDDIIDAYYDSVNPGLSDPMPSPAEKWNQLMEMISKGDLKEMLRACAKALADNDVETVELLVPEIRGMVSVYGEPIQRLGAYMLEGLVARLASSGSSIYKSLRCKEPAGAELLSYMHLLYEICPYFKFGYMSANGAIAEAMKDESRIHIIDFQIAQGSQWFSLIPALASRPGGPPRIRITGVDDSVSTYARGGGLEAVGLRLSRLAETCKVPFEFHAAGLDGSVVRLEDLGIQFGESIAVNFALMLHHMPDESVSVHNHRDRLIRLARCLSPKVVTLVEQESNTNTAPFLPRFIETLDYYSAVFESIDVTNFPRDHKERINVEQHCLAREIVNLIACEGAERVERHELVSKWRSRFAMAGFTPYPLSSFVNATIKNLLKNYSDKYTLEERNDALYLGWMSRPLVSSCAWR* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01176 546 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 124 540 IPR005202 -
Pte9g01176 546 MobiDBLite consensus disorder prediction 1 111 - -
Pte9g01176 546 ProSiteProfiles GRAS family profile. 166 546 IPR005202 -
Pte9g01176 546 MobiDBLite consensus disorder prediction 22 92 - -
Pte9g01176 546 Pfam GRAS domain family 176 546 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01176 Pte-Chr9 33397803 33400505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01176 1 547 GRAS Transcription Factor Family AT1G50600 58.303 0.0 615
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte9g01176 GRAS 1.3e-129 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01176 - - jre:108985037 755.362