Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01175 ATGAAGGCAAGCACACTCAAGTCTGGGGAAGGGTATTCAGAAGTTGAGCTTCAACTACGGGGTTCTGAGAAAGTAAATGTGAACGATCCGGGTCAAACTGAGGTGAGGGATGGGGGAGGTGGTGGCTCCGGCAGTGGTGCGGGAGGAGCCAGGTATAAGCTGATGTCGCCGGCGAAGCTTCCGATTTCGAGGTCACCGTGTATTACTATACCACCGGGGCTTAGTCCGTCTTCATTTTTGGAGTCACCTGTATTACTTTCCAACATTAAGGTGGAACCTTCTCCAACTACTGGATCTTTTACTAGGTCTCAGTTGATGCATGGTTCTTTCACATCTACTACTTTTCCTATAACTACGGCAAGCTCCACCAATACAGTTAATGAGAAAACGTCCAGCTTCTTTGAGTTTAAACCGCATAATGGTTCTGACAAGATAGAAGGTCAGTCCCTGGCTCAATCATTTGCCCCATCAATAACAGTTAAAAGTGAGACAGTCTCATCCTCCAATGACTTAAATCTTTCTGCTTCGATTCAAATGAATACTTCAGGTTCTTCTGCCCCAGAACTTGATTCAGATGAATTGAATCCAGGAGGAAAATCAATGGCCAGTCTTCAATTATCAGGAACTGATGCTAAAGAAATTGGGATTCCAGTTGCTGGTGAGAGGGTATCTGATGATGGTTACAACTGGAGGAAGTATGGGCAAAAGCATGTTAAAGGGAGTGAATTCCCAAGAAGCTATTACAAGTGTACTCATCCTAACTGTGACGTGAAAAAATTATTTGAGCGTTCTCATGATGGACAAATCACTGAGATAATCTACAAAGGAACACATGATCATCCTAAACCCCAACCTAGCCGTCGTTATACTGTAGGTACTACAATGTCCATACAAGATGAAAGACCCGACAAGGCTTCATCTATGGCACGTCTTGATGATGGGACAGCCAATGGGTATGGTCAAATTTCCCAGACAAGTGACCCAAATGCAACTCCTGATCAATCTCCTATGGTGAAAAATGATGATGGTCCGTATGGTCTGGGCGCTGCATCAAATAAGGTACACGATGATGATAATGACGACGACGACAACGATGAAGATCCATTTTCAAAGAGGAGGAGAATGGACATTGGAAGTGTTGACATCACTCCTGTTGTCAAGCCCATCCGTGAACCACGTGTTGTTGTACAAACATTGAGCGAGGTGGATATTTTAGACGATGGATACCGCTGGCGTAAATATGGGCAGAAGGTGGTGAGAGGAAATCCTAATCCAAGGAGTTATTACAAATGCACTAACGCTGGATGCCCTGTGAGGAAGCATGTTGAGAGGGCATCTCATGATCCAAAAGCAGTAATTACCACCTATGAAGGAAAGCATAATCATGACGTACCCACAGCAAAATCCAGCAGCCATGACACAGCAGGTCCAGCAACTGGAAGTGGAATGGCAAGAATTACCTCAGCTGAAAATAATGCAATCAGCCTCAATCTCGGTGTTGGCATTAACTCTGCTGGTGCTGAGAACAGAATGAATGGACAGGGTCAAGGACAACTGCTGCACTCTGAATACGGACAAAACCAAACTCAACCCAGCCATTCGAATATGAAGCTAGTTAGAACAAGCCACCCGGTTTCAGCTTATTTTGGCGTTGTTAATACAAATACATATGGTTCTAGAGGAAGTTTGAGTGAAGGGCACTCAATGGATGGCTCATCACTAAGCCATTCCACTTATCCTTACCCTCAGAGTATCGGAAGAATATTGACCGGACCATAG 1779 0.4452 MKASTLKSGEGYSEVELQLRGSEKVNVNDPGQTEVRDGGGGGSGSGAGGARYKLMSPAKLPISRSPCITIPPGLSPSSFLESPVLLSNIKVEPSPTTGSFTRSQLMHGSFTSTTFPITTASSTNTVNEKTSSFFEFKPHNGSDKIEGQSLAQSFAPSITVKSETVSSSNDLNLSASIQMNTSGSSAPELDSDELNPGGKSMASLQLSGTDAKEIGIPVAGERVSDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCDVKKLFERSHDGQITEIIYKGTHDHPKPQPSRRYTVGTTMSIQDERPDKASSMARLDDGTANGYGQISQTSDPNATPDQSPMVKNDDGPYGLGAASNKVHDDDNDDDDNDEDPFSKRRRMDIGSVDITPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTAKSSSHDTAGPATGSGMARITSAENNAISLNLGVGINSAGAENRMNGQGQGQLLHSEYGQNQTQPSHSNMKLVRTSHPVSAYFGVVNTNTYGSRGSLSEGHSMDGSSLSHSTYPYPQSIGRILTGP* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01175 592 MobiDBLite consensus disorder prediction 1 52 - -
Pte9g01175 592 FunFam WRKY transcription factor 215 284 - -
Pte9g01175 592 Gene3D WRKY domain 218 284 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte9g01175 592 Gene3D WRKY domain 390 466 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte9g01175 592 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 80 507 IPR044810 GO:0003700
Pte9g01175 592 MobiDBLite consensus disorder prediction 458 483 - -
Pte9g01175 592 FunFam WRKY transcription factor 33 392 458 - -
Pte9g01175 592 MobiDBLite consensus disorder prediction 317 336 - -
Pte9g01175 592 SUPERFAMILY WRKY DNA-binding domain 222 283 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte9g01175 592 MobiDBLite consensus disorder prediction 273 376 - -
Pte9g01175 592 Pfam WRKY DNA -binding domain 406 462 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte9g01175 592 Pfam WRKY DNA -binding domain 225 281 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte9g01175 592 ProSiteProfiles WRKY domain profile. 219 283 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte9g01175 592 ProSiteProfiles WRKY domain profile. 400 465 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte9g01175 592 SUPERFAMILY WRKY DNA-binding domain 397 465 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte9g01175 592 SMART WRKY_cls 224 282 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte9g01175 592 SMART WRKY_cls 405 464 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte9g01175 592 MobiDBLite consensus disorder prediction 287 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01175 Pte-Chr9 33390887 33397119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01175 55 593 WRKY Transcription Factor Family AT4G26640 53.734 1.90e-175 505
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte9g01175 WRKY 1.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01175 - - qsa:O6P43_013613 759.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g01175 9 33390887 33397119 Pte9g01175 9 33390887 33397119 RCT