Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01163 ATGGGTATTTCTCGTGATTCTATGCACAAGAGACGTGCCACTGGTGGCAAGAAGAAGGCTTGGAGGAAGAAGAGAAAGTACGAGTTGGGAAGGCAGACTGGTAACACAAAGTTGTCCAGCAACAAGACAGTGAGAAGAATCCGAGTTCGTGGTGGCAATGTCAAGTGGCGGGCACTCAGACTCGACACAGGGAACTATTCATGGGGAAGTGAGGCTGTGACCAGGAAGACAAGAATTCTTGATGTCGTTTACAATGCATCTAACAATGAGCTGGTCCGTACTCAGACTCTGGTTAAGAGTGCTATAGTTCAGGTAGATGCTGCACCATTTAAGCAGTGGTACCTCCAGCATTATGGTGTTGATGTTGGCCGCAAGAAGAAGACCTCCAGCACCAAGAAGGAATCAGAGGTGGATGCTGAAGCTGCCGCTGAAGAAGTGAAGAAAAGCAATCATGTTACCAGGAAGTTAGAGAAGCGTCAACAGAGCCGTCAGCTTGATCAACATATAGAAGAACAATTTGGTGGAGGCCGTTTGCTTGCTTGCATCTCATCCAGGCCTGGCCAATGTGGCCGTGCTGATGGATATATATTGGAGGGCAAAGAGCTGGAATTCTATATGAAGAAGCTCCAGAAGAAGAAGGGCAAGGGTGCTGCTGCTTAA 660 0.4788 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQTGNTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDVGRKKKTSSTKKESEVDAEAAAEEVKKSNHVTRKLEKRQQSRQLDQHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQKKKGKGAAA* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01163 219 Gene3D - 162 215 - -
Pte9g01163 219 Gene3D - 33 161 - -
Pte9g01163 219 ProSitePatterns Ribosomal protein S8e signature. 11 30 IPR018283 GO:0003735|GO:0005840|GO:0006412
Pte9g01163 219 FunFam 40S ribosomal protein S8 162 215 - -
Pte9g01163 219 MobiDBLite consensus disorder prediction 11 26 - -
Pte9g01163 219 FunFam 40S ribosomal protein S8 32 161 - -
Pte9g01163 219 CDD Ribosomal_S8e_like 5 197 - -
Pte9g01163 219 Pfam Ribosomal protein S8e 5 197 IPR022309 -
Pte9g01163 219 MobiDBLite consensus disorder prediction 1 41 - -
Pte9g01163 219 PANTHER 40S RIBOSOMAL PROTEIN S8 1 215 IPR001047 GO:0003735|GO:0005840|GO:0006412
Pte9g01163 219 NCBIfam ribosomal protein eS8 1 199 IPR001047 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01163 Pte-Chr9 33288260 33290674 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01163 1 206 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 83.010 5.64e-125 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01163 K02995 - jre:108996676 354.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g01163 9 33288260 33290674 Pte9g01163 9 33288260 33290674 RCT