Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01154 ATGGCGTCTTCTTTGGACTCCTGGATAAAAGAATACGATGAAGCTTTAAAACTTTCTGAGGATATCTCTGGCATGATCTCTGAGCACAGTTCCTTAACTGCATCAGGGCCAGATGCTCAGCGTCATGCTTCTTCTATAAGAAGGAAAATTACAATATTGGGAACCAGATTAGATAGTTTGGAGGCCCTTTTATCTAAGCTTCCTGGGAAACGACCAATTTCAGATAAAGAGATGAATCGTCGCAAGGAAAACATTGCAAATTTGAGATCAAAAGTTAACCAGATGGCTGCCACTTTTAACATGTCAAACTTCGCGAACAGGGATAGTTTGCTTGGGCCAGAGACAAAAGGTCCTGATGCAATAGCCAGAACTGTGAACATGGACAATCATGGAGTTGTTGGATTTCAACGGCAAATTATGAGAGAGCAAGATGAGGGACTTGAGAAATTAGAGGAGACTGTAATAAGTACAAAACATATTGCGCTGGCAGTGAATGAAGAACTGGGCCTACATACTAAGCTCATTGATGACTTGGATCAACATGTTGATGTTACAGACTCTCGACTAAGAAGGGTTCAGAAGAACTTGGCAATATTGAACAAACGCGCCAAGGGTGGTTGCACATGCTGTTGCATGATGTTATCGGTTGTAGGTATAGCTGTTCTTGTAGGTGTTGCATGGCTATTGATCAAATACTTGTAA 702 0.4145 MASSLDSWIKEYDEALKLSEDISGMISEHSSLTASGPDAQRHASSIRRKITILGTRLDSLEALLSKLPGKRPISDKEMNRRKENIANLRSKVNQMAATFNMSNFANRDSLLGPETKGPDAIARTVNMDNHGVVGFQRQIMREQDEGLEKLEETVISTKHIALAVNEELGLHTKLIDDLDQHVDVTDSRLRRVQKNLAILNKRAKGGCTCCCMMLSVVGIAVLVGVAWLLIKYL* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01154 233 Gene3D - 139 201 - -
Pte9g01154 233 Pfam SNARE domain 174 223 IPR000727 -
Pte9g01154 233 Coils Coil 78 98 - -
Pte9g01154 233 CDD SNARE_Qc 140 197 - -
Pte9g01154 233 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 137 199 IPR000727 -
Pte9g01154 233 PANTHER SYNTAXIN 34 217 IPR045242 -
Pte9g01154 233 SUPERFAMILY SNARE fusion complex 134 198 - -
Pte9g01154 233 FunFam syntaxin-51 isoform X2 139 201 - -
Pte9g01154 233 SMART tSNARE_6 132 199 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01154 Pte-Chr9 33222431 33225669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01154 1 234 SNARE and Associated Proteins AT1G79590 69.658 3.85e-118 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01154 K08503 - qsa:O6P43_014352 382.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g01154 9 33222431 33225669 Pte9g01154 9 33222431 33225669 RCT