Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01130 ATGCGGTGGACTAGAGGCCCTATCACAGGCCATGGCTCCAGTGCTATTGTCTCTTTAGCTAGCTTCATCCCATCTGGTGAATTACTTGATGTCAAGTCCAATGAGTTGTGCAAGTCTCTATGCTTGCAGAGAGAACAGCAACTTTTGTCAAATTTATGTACTCCTTATGTAATTAAGTGCAATGGCTTTGATGTCACAGTTGAAAATAATGTGACATTGTACAATCTTTTCATAGAGTACATATCAGGTGGCAATCTCTATGAAGTGATTCAATGCCATGGAGTTTGCCTAGGAGAGTCTGTCATAAGATCATACACCAAGCAAATACTGCAAGGTTTGGCTTATCTCCATGAAAAGAAAATAGTACATTGTGATATTAAAAGTCATAATATTTTGATAGGGGGAGAGGGTGTTAAGATTGCTGATCTGGGTCGTGCTAGATTGGAGGAAAGAGAACCAGGAAAGGGAAATTTTGATTCATTACCGTTTTCCGGCACACCGACATTCATGGCACCAGAAGTGGCTAGAGTAGAATATCTAAGTTTTCCTGCGGATATATGGGCTTTTGGCTGTACTATCATTGAAATGGCAACTGGCAGCAGTCCATGGCCAAAAGAGAGGGACCCTATATTGGTTCTCTATAGGATTGGCTATTCTAATGAAATTCCAGATACCCCATGTTGGTTTTCTGATAAAGCTAAGGACTTTGTGCACAAATGTTTGATAAGAGATTCAAAAGAGAGGTGGACAGCTACAGAGCTTCTTGAACATCCATTTCTTGAAGAGTTGGGTCTATAA 798 0.4048 MRWTRGPITGHGSSAIVSLASFIPSGELLDVKSNELCKSLCLQREQQLLSNLCTPYVIKCNGFDVTVENNVTLYNLFIEYISGGNLYEVIQCHGVCLGESVIRSYTKQILQGLAYLHEKKIVHCDIKSHNILIGGEGVKIADLGRARLEEREPGKGNFDSLPFSGTPTFMAPEVARVEYLSFPADIWAFGCTIIEMATGSSPWPKERDPILVLYRIGYSNEIPDTPCWFSDKAKDFVHKCLIRDSKERWTATELLEHPFLEELGL* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01130 265 SUPERFAMILY Protein kinase-like (PK-like) 6 263 IPR011009 -
Pte9g01130 265 Pfam Protein kinase domain 24 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte9g01130 265 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 260 - -
Pte9g01130 265 Gene3D Transferase(Phosphotransferase) domain 1 2 263 - -
Pte9g01130 265 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Pte9g01130 265 CDD STKc_MAPKKK 2 260 - -
Pte9g01130 265 SMART serkin_6 3 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte9g01130 265 ProSiteProfiles Protein kinase domain profile. 3 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01130 Pte-Chr9 33046537 33047334 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01130 1 262 MAP Kinase Kinase Kinase AT5G55090 55.133 2.78e-98 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pte9g01130 Pkinase 3.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01130 K20716 - jre:108983203 327.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g01130 9 33046537 33047334 Pte2g00437 2 3397240 3398751 RCT
Pte17g00573 17 8440176 8441411 Pte9g01130 9 33046537 33047334 RCT
Pte15g00973 15 7174233 7175850 Pte9g01130 9 33046537 33047334 RCT
Pte1g01567 1 37285144 37286989 Pte9g01130 9 33046537 33047334 RCT
Pte9g01130 9 33046537 33047334 Pte9g01130 9 33046537 33047334 RCT