Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01115 ATGCCCACACTCCATTGTTTTGTATTCAAAAGAGTTGATGAAATGGTCAAGCGTGGCATGGTAAAGGAGCTTAGACCCTATTTCAATCCTAATGGGGAATACTCTAGAGGGATTCGAAAAGCAATTGGGGTACCTGAATCTGATCAATATTTTGGGTTTGAAGCATTTGAAAGCCAAGAACCCCTCGAGATACTGTTTCAACTAGCAATGTCTGAAATGAAAGAAAACAACTGTAAATTAGCATGCAGACAGTTGGAGAAAATCCATAGGCTTCTAAATGTCAAAAGGTGGAAGATGCTCAAAATCGATGCCACACAAGTTTTTCTGAAACATGTTAGTTGCAGAACCAAGTGCAGACATTGTTCACAAATTTCTGACAAGTAA 384 0.388 MPTLHCFVFKRVDEMVKRGMVKELRPYFNPNGEYSRGIRKAIGVPESDQYFGFEAFESQEPLEILFQLAMSEMKENNCKLACRQLEKIHRLLNVKRWKMLKIDATQVFLKHVSCRTKCRHCSQISDK* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01115 127 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 3 97 - -
Pte9g01115 127 Pfam IPP transferase 8 86 - -
Pte9g01115 127 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 3 111 IPR039657 -
Pte9g01115 127 FunFam Adenylate isopentenyltransferase 5, chloroplastic 1 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01115 Pte-Chr9 32936305 32936688 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01115 7 109 C2H2 Transcription Factor Family AT2G27760 26.923 4.05e-09 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01115 K10760 - jre:109010913 140.198