Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01111 ATGGTATCCATTTGCAGTCCCAATTTAATCGACTGGGCACCTTCTAAATCTTCCCTTTCCAACACATTTCCACTATATTTTCAATTTGAGCAAAGCCCGTTTCATAATTTTCTGCAAATACCATCGCCAAGGAAACTGTCGCAATCTTCGTTGGTGAGCCGGATTCAATGCGGGCTTCGTGATCTCCGAGCTAGAATTGATTCTGTGAGTAAAACCCAGAAAATTACTGAAGCCATGAAGCTTGTTGCGGCTGCCAGGGTCCGTAGAGCTCAAGAAGCAGTCATAAATGGCCGACCCTTTTCTGGAAAACTTGTTGAAGTTTTATACAACATCATTGAACAGCTTCAACTTCAAGGAGAGGATATAGATGTTCCTTTGACTCATGTTAGACCTGTCAAGAAAGTTGCTCTTGTTGTCGTCACAGGTGATAGAGGTCTCTGTGGCGCTTTCAACAATGCAGTGATAAAAAAGGCTGAGACCCGAATTGCCGAATTGAAAAAGCTTGGATTGGATTTCACTGTCGTTAGTATAGGCAAAAAGGGTAACTCATATTTTAGGCGTAGGCCTTATATTCCAGTTGATAGGTTCATTGAAGGTGGGAACTTTCCCACTACAAAAGAAGCACAGGCAATTGCTGATGTTGTTTTTTCACTCTTTATTACTGAAGAGGTAGATAAGGTTGAGCTTGTATTTACAAAATTTGTGTCTTTAATGAAGTCAGATCCTGTTATTCGTACATTGCTTCCTTTTTCATCAAAAGGAAAAGTTTTTGATATGAATGGGAATTCTGTTGATGCCATTGAGGATGAGTTCTTTAGATTGACAACAAAGGAAGGGAAGTTGACTGTAGAAATAGATAGTGTGCGAAAGGAGAGGGAAAAGTTTTCGCCTTTAATGCAGTTTGAGCAAGACCCTGCTCAGATTCTTGATGCTATGATGCCTCTTTATTTGAATTGTGAGGTATTGAGAGCGTTGCAGGAATCAATCGCCAGTGAACTTGCAGCAAGGATGGTCGCTATGCGCAATGCGACAGATAATGCAGTTGAGTTGAAGAACGATCTGTCAATTGCTTACAGAAAACAAAGACAAACCAAAATCACTGGGGAGATACTTGAGATTGTTGCTGGGGCTGATGCATTGTCAGAATTTGATTGA 1155 0.4078 MVSICSPNLIDWAPSKSSLSNTFPLYFQFEQSPFHNFLQIPSPRKLSQSSLVSRIQCGLRDLRARIDSVSKTQKITEAMKLVAAARVRRAQEAVINGRPFSGKLVEVLYNIIEQLQLQGEDIDVPLTHVRPVKKVALVVVTGDRGLCGAFNNAVIKKAETRIAELKKLGLDFTVVSIGKKGNSYFRRRPYIPVDRFIEGGNFPTTKEAQAIADVVFSLFITEEVDKVELVFTKFVSLMKSDPVIRTLLPFSSKGKVFDMNGNSVDAIEDEFFRLTTKEGKLTVEIDSVRKEREKFSPLMQFEQDPAQILDAMMPLYLNCEVLRALQESIASELAARMVAMRNATDNAVELKNDLSIAYRKQRQTKITGEILEIVAGADALSEFD* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01111 384 NCBIfam ATP synthase F1 subunit gamma 58 380 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pte9g01111 384 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 60 380 IPR035968 GO:0015986|GO:0045261|GO:0046933
Pte9g01111 384 PRINTS ATP synthase gamma subunit signature 132 151 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pte9g01111 384 PRINTS ATP synthase gamma subunit signature 327 346 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pte9g01111 384 PRINTS ATP synthase gamma subunit signature 225 242 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pte9g01111 384 PRINTS ATP synthase gamma subunit signature 358 379 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pte9g01111 384 FunFam ATP synthase gamma chain, chloroplastic 277 380 - -
Pte9g01111 384 Gene3D ATP synthase, gamma subunit, helix hairpin domain 276 380 - -
Pte9g01111 384 Gene3D ATP synthase, gamma subunit, helix hairpin domain 57 126 - -
Pte9g01111 384 ProSitePatterns ATP synthase gamma subunit signature. 366 379 IPR023632 -
Pte9g01111 384 FunFam ATP synthase gamma chain, chloroplastic 57 126 - -
Pte9g01111 384 PANTHER ATP SYNTHASE GAMMA CHAIN 11 380 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pte9g01111 384 Gene3D - 127 252 - -
Pte9g01111 384 CDD F1-ATPase_gamma 59 377 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pte9g01111 384 FunFam ATP synthase gamma chain, chloroplastic 128 251 - -
Pte9g01111 384 Pfam ATP synthase 59 380 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pte9g01111 384 Coils Coil 340 360 - -
Pte9g01111 384 Hamap ATP synthase gamma chain [atpG]. 56 380 IPR000131 GO:0015986|GO:0045261|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01111 Pte-Chr9 32927151 32929134 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01111 33 382 Primary Pumps ATPases AT1G15700 67.139 2.08e-163 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01111 K02115 - qsa:O6P43_013711 523.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g01111 9 32927151 32929134 Pte9g01111 9 32927151 32929134 RCT
Pte9g01111 9 32927151 32929134 Pte2g00428 2 3341142 3343324 RCT