Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01110 ATGATATTTTTCTCAGCACAGACACAGAAAATCTCGCATTATTTCCTTCCTGTTATTCAGAACAGACGACGGCCAGCGGAAGTGGTCATGTTTACGAGGTTGTCGGAAGTGTTGACCGTCATATCAGCTGTGCTGTTGTGTTCTGGTTTCTCAACAATTTCGGCAGCTACCATCACACCGGGCTCAAACCTTTTGGCTTCAAATCCAAACCAAACATGGGGTTCACCTAAAAACATTTTCTCTTTTGGTTTGATTCCAGTCCAGCCGCCCACCTCACCCCCTTCATTCGTGGCAGCCATATCTTATGCTGGAGGTGCGCCTATCATATGGTCTGCTGGTAATGGTGCCACCGTCGATTCACAAGGGTCTCTGCGTTTTCTCTCAACAGGTGGCCTGCAATTGGTCAATGGTTCCGGCACTGTTGTCTGGGATACAGGTACATCTAACAAAGGCGTTTCGTCAGCTGAACTTAATGACGCGGGTAACTTCGTACTATCAAATGGGAGCGGACCTGTGTGGTCAACCTTCGATAATCCAACTGATACCATCGTGCCGCTTCAGAATTTCACAGTCAATAAGGTTCTACGATCTGGGAACTATTCCTTTAGCCTTCTCAGAGCCGGTAATCTCACACTTAAATGGAACGGTAGCATAGTATATTGGAACCAAGGTCTTAATTCTACTGTGAATTCAACTGTTAATGCAACTCTATTATCCCCAGTCTTGTCTTTGCAATCAATTGGTATTTTGAAACTCGACGATCCTATGTTGCCAAGTTCCGCAACAATGGCTTATAGTAGTGATTATGCTGAAAGTAGTGATATACTGAGGGTTTTGAAGTTAGATAATGATGGGAATTTGAGAATTTACAGTTCACCTAAAGGTAGTGGAACTACAACAGAAAGATGGGCTGCTGTTAAGGATCAATGTGAGGTTTTTGGTTACTGTGGCAATATGGGTATCTGTGGCTATAATGATTCTAGTCCAGTTTGTAGTTGTCCATCTCAGAATTTCGACCCCGTTGATCCGAATGATAGTAGAAAAGGTTGCAAGAGGAAGATTGAAATTAAGGATTGTCCAGGAAGTGCAACCATGCTGCAATTGAATCATGCTCAATTCTTGACATATCCTCCTGAGTCCAATCCGAATACAGATATCTTTTTTATCGGTATAACAGCTTGTCAAGGAAATTGTCTAGGAGGATCAGCCTGTGTCGCTTCCACTTCTCTATCTGATGGAACTGGGCTATGTTACCTAAAGAATGAAAATTTTGTCAGTGGATACCAAAACCCTTCTCTACCCAGCACTTCTTTTGTTAAGGTATGTGGACCAGCAATTCCAAATGCGCCACCTTCTTTGCAGGAAGCAGATAAAAGCAATCGTCGGAAAGTACGTGCGTGGATAGTTGTTCTTGTGGTTGTAGGGACCCTTTTGGGAATGCTCATCTTTGAGGGTGGTTTGTGGTTCTGGTTTTGTAGGAAAAACCCCAAGTTTGGCGCACTGTCGGCGCAATATGCTCTTCTTGAGTATGCTTCTGGTGCTCCAGTTCAGTTTTCCTACAGAGAGCTGCAGCGCTCAACCAAAGGTTTCAAAGATAAGCTTGGTACTGGAGGATTCGGAGCTGTGTATAGAGGAGTCCTCTCTAATAAAACTGTTGTTGCAGTGAAGCAACTTGAAGGTATCGAGCAAGGGGAGAGGCAATTTAGGATGGAGGTCGCCACTATAAGTAGCACTCACCACTTGAACTTGGTGAGGTTGATCGGATTTTGCTCTGAAGGGCGACATCGCTTGTTGGTTTACGAGTTCATGAGAAATGGATCACTTGATAATTTTCTTTTCCCTGCAGAACAATCAGGAAAGTTGTTGAACTGGGAACAACGATTCAGTATAGCCCTTGGTACTGCAAAGGGAATCACCTATCTTCATGAGGAGTGTCGAGACTGTATTGTCCATTGTGACATAAAACCAGAAAACATACTTTTGGATGATAACCATGTTGCTAAAGTCTCGGATTTTGGTCTTGCGAAGCTCATAAATCCAAAGGATCATAGGAACCGGACTTTGATCAGTGTGAGAGGAACTCGGGGATACTTAGCTCCTGAGTGGCTCGCAAATCTTCCAATAACTACAAAGTCTGATGTTTACAGCTTTGGAATGGTTTTGCTTGAGATAGTAAGTGGGCGAAGGAATTTTGATTTATCAGAAGATACAAATCGTAAGAAATATTCTGTCTGGGCTTATGAAGAGTTTGAGAAAGGTAACTTCACTGCTATTATGGACAGAAGGTTGACTGACCAAGTCGTTGACATAGAAGAAATAAAGCGTGCAATTCAGGTGAGCTTCTGGTGCATACAGGAGCAGCCATCACAGAGACCGACAATAGGGAAAGTGGTTCAAATGCTGGAAGGTGTCGTGGAGATTGAGATGCCGCCTCCACCAAAAGTCTCATCAGAAGTGTCTATGAGTGGAACCAGCTTTATGATTAGCAGCAATACAAGTGGTCTGTCGACTGCAACAGTCTCAGTGCATGCATTGTCATCATCTTCGTCTATGCAGCCAGCAGGGGCTTCTTCACTAGTTTCCGGGAGAAATACAGAGAAGGCGTCTTCGTCCCTTTTACAAGACCCTTGA 2631 0.4382 MIFFSAQTQKISHYFLPVIQNRRRPAEVVMFTRLSEVLTVISAVLLCSGFSTISAATITPGSNLLASNPNQTWGSPKNIFSFGLIPVQPPTSPPSFVAAISYAGGAPIIWSAGNGATVDSQGSLRFLSTGGLQLVNGSGTVVWDTGTSNKGVSSAELNDAGNFVLSNGSGPVWSTFDNPTDTIVPLQNFTVNKVLRSGNYSFSLLRAGNLTLKWNGSIVYWNQGLNSTVNSTVNATLLSPVLSLQSIGILKLDDPMLPSSATMAYSSDYAESSDILRVLKLDNDGNLRIYSSPKGSGTTTERWAAVKDQCEVFGYCGNMGICGYNDSSPVCSCPSQNFDPVDPNDSRKGCKRKIEIKDCPGSATMLQLNHAQFLTYPPESNPNTDIFFIGITACQGNCLGGSACVASTSLSDGTGLCYLKNENFVSGYQNPSLPSTSFVKVCGPAIPNAPPSLQEADKSNRRKVRAWIVVLVVVGTLLGMLIFEGGLWFWFCRKNPKFGALSAQYALLEYASGAPVQFSYRELQRSTKGFKDKLGTGGFGAVYRGVLSNKTVVAVKQLEGIEQGERQFRMEVATISSTHHLNLVRLIGFCSEGRHRLLVYEFMRNGSLDNFLFPAEQSGKLLNWEQRFSIALGTAKGITYLHEECRDCIVHCDIKPENILLDDNHVAKVSDFGLAKLINPKDHRNRTLISVRGTRGYLAPEWLANLPITTKSDVYSFGMVLLEIVSGRRNFDLSEDTNRKKYSVWAYEEFEKGNFTAIMDRRLTDQVVDIEEIKRAIQVSFWCIQEQPSQRPTIGKVVQMLEGVVEIEMPPPPKVSSEVSMSGTSFMISSNTSGLSTATVSVHALSSSSSMQPAGASSLVSGRNTEKASSSLLQDP* 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01110 876 ProSitePatterns Protein kinases ATP-binding region signature. 534 556 IPR017441 GO:0005524
Pte9g01110 876 ProSiteProfiles Protein kinase domain profile. 528 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte9g01110 876 ProSiteProfiles Bulb-type lectin domain profile. 180 302 IPR001480 -
Pte9g01110 876 Pfam PAN-like domain 360 426 IPR003609 -
Pte9g01110 876 MobiDBLite consensus disorder prediction 846 876 - -
Pte9g01110 876 PANTHER OS07G0415500 PROTEIN 40 813 - -
Pte9g01110 876 SUPERFAMILY Protein kinase-like (PK-like) 511 802 IPR011009 -
Pte9g01110 876 ProSiteProfiles Bulb-type lectin domain profile. 49 178 IPR001480 -
Pte9g01110 876 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 179 305 - -
Pte9g01110 876 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 603 811 - -
Pte9g01110 876 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 54 178 - -
Pte9g01110 876 CDD B_lectin 62 179 IPR001480 -
Pte9g01110 876 FunFam S-receptor-like serine/threonine-protein kinase 501 602 - -
Pte9g01110 876 CDD EGF 310 335 - -
Pte9g01110 876 CDD STKc_IRAK 534 803 - -
Pte9g01110 876 Gene3D - 50 177 IPR036426 -
Pte9g01110 876 Gene3D - 178 305 IPR036426 -
Pte9g01110 876 SMART serkin_6 528 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte9g01110 876 Pfam D-mannose binding lectin 109 197 IPR001480 -
Pte9g01110 876 Pfam S-locus glycoprotein domain 269 334 IPR000858 GO:0048544
Pte9g01110 876 Pfam Protein kinase domain 531 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte9g01110 876 ProSitePatterns Serine/Threonine protein kinases active-site signature. 649 661 IPR008271 GO:0004672|GO:0006468
Pte9g01110 876 PIRSF SRK 27 853 IPR024171 GO:0004674
Pte9g01110 876 Gene3D Transferase(Phosphotransferase) domain 1 603 810 - -
Pte9g01110 876 Gene3D Phosphorylase Kinase; domain 1 500 602 - -
Pte9g01110 876 SMART blect_4 62 179 IPR001480 -
Pte9g01110 876 SUPERFAMILY alpha-D-mannose-specific plant lectins 108 224 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01110 Pte-Chr9 32897622 32902056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01110 501 811 Receptor kinase-like Gene Family AT5G20050 44.000 2.99e-80 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pte9g01110 Pkinase 2.6e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01110 - - qsa:O6P43_004111 1249.96