Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01107 ATGGGGGCTATTAGGGGCCAGTTCACAGAAGCTGGGTTTCTTGAGGGTGCTGGGAAAGGAGCTGTTATCGGAGCCATTGCAGCTTTTCAGTTGCTTGAGCTGGATTTCAGTGATGATAATGATGAATCATTTCCCAAGGTTAACCTTTTAGGAAGAATATTACTGGGAAAGAGTTTCGTGGAATGCATATATCTCACCGTAGCAAAAGCCTACGAGTGGAATATTTTTACAGAAACAACCTTTGAAGATATCTCAGATGCTTATGACACATACAGAGTGACAGGATTAGCAGATCATTTGATTAAAAACCTTCCCATTCTTCGTTTCAACTCATCCAATATGTCAAGATCATATAATGACTTGTGCTGCTCAATTTGCATACAGGACTTGGAAGACGGAGATTTAACCAAAGTACTCCCAAAATGCGGGCACTGTTTTCACCAGAAATGCATAGATATATGGTTAACTCGACGAGGATCTTGTCCCATGTGCAGGACTGTTATTTTCAATGAAATAAATAACTAA 525 0.4 MGAIRGQFTEAGFLEGAGKGAVIGAIAAFQLLELDFSDDNDESFPKVNLLGRILLGKSFVECIYLTVAKAYEWNIFTETTFEDISDAYDTYRVTGLADHLIKNLPILRFNSSNMSRSYNDLCCSICIQDLEDGDLTKVLPKCGHCFHQKCIDIWLTRRGSCPMCRTVIFNEINN* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01107 174 CDD RING-H2_EL5-like 122 165 - -
Pte9g01107 174 ProSiteProfiles Zinc finger RING-type profile. 123 165 IPR001841 -
Pte9g01107 174 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 84 169 IPR013083 -
Pte9g01107 174 SUPERFAMILY RING/U-box 117 171 - -
Pte9g01107 174 SMART ring_2 123 164 IPR001841 -
Pte9g01107 174 Pfam Ring finger domain 123 165 IPR001841 -
Pte9g01107 174 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 1 166 IPR044523 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01107 Pte-Chr9 32883409 32884303 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01107 2 165 C3H Transcription Factor Family AT5G66070 33.333 1.56e-26 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01107 - K19041 gmx:100305612 169.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g01107 9 32883409 32884303 Pte9g01107 9 32883409 32884303 RCT