Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01091 ATGGGCAACAGATTATCAGGTCCTTTCCCTCAAGTTCTCACAAGAATCACAACCCTCACAAACCTGAGTATAGAAGGAAACCTTTTTCAAGGTCCAATTCCATCAGAAATTGGCAAGTTGGTCAACTTGAAAAAATGCATTTTATCCTCAAATTCCTTCACTGGAGAATTGCCTGTAGCGCTTTCCAAGTTGACCAGCTTGACTGATATGAGGATAAGTGACAATAATTTCTCTGGAAGAATTCCAAATTTTATCAGCAAATGGACTCTACTTGAAAAACTGCAAATAGAGGGTTCTTCTCTTGAAGGACCAATACCTTCCAGTATTTCTGCATTGACAAGATTGACTGATTTGAGGATAACTGACTTAAAAGATGGAGGGTCTACATTTCCACCATTAAGTAACATGGTTTCCATTAAGGCATTGATACTGCGAAATTGTTTGGTTTCTGGAAAAATACCTGATTATGTCGGGAATATGAAAACGCTGAAAGTTTTGGATTTGAGTTTCAACAACTTGACTGGAGAATTACCTCAAACTTTCGTGAACCTGGCAAAAGTAGATTTCATTTATGTGACAGGGAACAAGCTCACTGGAACCGTACCCGGTTGGGTGCTTGGAAGAAACAAGAATATTGATTTTTCATACAATAATTTCACCTGGGAAACCTCAAGCACAAATGAATGTCCCAGAGGAAGTGTAAACTTAGTGGAGAGCTATTCTTCCTTCTCAGTGAATAAACAAAGTTCTAAGATTCAACCTTGCCTTCAGAGGAATTTTCCATGCTTTACCCCCAGAAACCAACGACGTTTCTCTTTGCACATTAACTGTGGTGGTAAAGAAGCAAATATCAATGGCGTTACTTACGAAGGTGACACAGAAGCAAGGGGCGCGTCAATGTTTTATTCCGGTCTAAATTGGGCATTTAGTAGTACAGGCAACTTCATGGACAATGATCTTGATGGTGATGAGTACATTCAGGGAAATTCAACTACTCTTTCCAATGTGACTGCCATGAATACACCACTGTACACAACAGCTCGTGCTTCTCCCCTCTCTCTCACATATTATGGACTATGCCTCATGAATGGGAATTACACTGTTAAGCTCCACTTCGCAGAGATTGTGTTCACCAATGATAAAACATTTAGGAGCCTTGGAAAACGTGTTTTCGATATACACATACAGGAGAAGTTAGTACTGAAAGATTTTAATATAGAAAAAGAGGCTGGGGGAACTGCTAAGCCAATTGTGAAGACATTTACAGTGGCTGTGACAAGTAATACACTGAAGATACATTTTTACTGGGGTGGAAAGGGCACAACTGGCATACCAACTAGAGGAAGCTATGGACCTCTTATATCTGCCATATCTGTAGATCCAAACTTCACACCTCCATCATCTGAGAAAAAGAAATCTTACATCATCTTGGTTGCTGGCATTATGGTTGCTGCAGTATTTCTCGTCCTCCTCCTTCTAGTCATCATGAGGAGGAAAGGTTATCTAGGGGGAAATATCTCAGTAGATAAAGAGCTTAGAGGAGTAGACCTGCAGACAGGATTATTCACACTAAGGCAAATGAAGGCTGCAACTAGGAATTTTGATCCAGCATATAAAATTGGGGAAGGTGGATTTGGTTCTGTTTATAAGGGCCTGTTATCAGATGGTACAGTAATTGCGGTAAAGCAGCTGTCTTCAAAATCTAAGCAAGGAAACCGTGAATTTGTGAATGAGATTGGAATGATATCAGGACTGCAGCACCCCAATCTTGTCAAGCTTTTCGGTTGTTGTGTTGAGAGTAACCAGTTGTTGCTGATCTATGAGTACATGGAAAACAATTGTCTAGCCCGTGCACTCTTTGGAAAGGATCCAGCCAGCAGACTACAACTGGATTGGCCTACCAGACAGAAAATTTGCCTTGGCATAGCTAGAGGTTTGGTATATCTCCATGAAGAATCAAGATTAAAAATTGTCCACAGAGACATCAAAACAAGTAATGTCTTGCTTGACAAGAATTTCAATGCTAAGATATCAGATTTTGGTTTAGCTAAGCTTTATGAGGAAGAGAATACACACATCAGCACTAGGATTGCTGGCACAGTTGGCTACATGGCTCCTGAGTATGCAATGCGCGGCCACTTAACCAACAAAGCAGATGTGTATAGTTTTGGGGTTGTTGCATTGGAAATTGTCAGTGGAAAGAGCAACACAAACTACAGGCCAACTGAGGAGTTCTTTTACCTTCTTGACTGGGCCTACGTTTTGCAAGAGAGGGGGAGTCTACTTGAGTTGGTCGATCCAGCATTGGGTTCAGAATACTCTGCAGAGGAGGCAATGTTAATGCTTAATGTAGCTCTTCTATGTACAAATGCATCCCCTACACTTAGGCCTACAATGTCACAAGTAGTGAGCATGCTTGAAGGCCGAACTGCAGTTCAAGACCTTCTATCCGATCCAGGATTCTCAGCAATGAACTCAAAATATAAAGCCATAAGAAAACATTTCTGGCAGCATCAAACTGGCACAGAAAGCATGTCAACTTTTAATGCAGTCACTGATACTTTTAGTTCATGTGAAACAGAAGAGAACTACCCTCCTACTAGTACAAAGCTCCAATAG 2619 0.4086 MGNRLSGPFPQVLTRITTLTNLSIEGNLFQGPIPSEIGKLVNLKKCILSSNSFTGELPVALSKLTSLTDMRISDNNFSGRIPNFISKWTLLEKLQIEGSSLEGPIPSSISALTRLTDLRITDLKDGGSTFPPLSNMVSIKALILRNCLVSGKIPDYVGNMKTLKVLDLSFNNLTGELPQTFVNLAKVDFIYVTGNKLTGTVPGWVLGRNKNIDFSYNNFTWETSSTNECPRGSVNLVESYSSFSVNKQSSKIQPCLQRNFPCFTPRNQRRFSLHINCGGKEANINGVTYEGDTEARGASMFYSGLNWAFSSTGNFMDNDLDGDEYIQGNSTTLSNVTAMNTPLYTTARASPLSLTYYGLCLMNGNYTVKLHFAEIVFTNDKTFRSLGKRVFDIHIQEKLVLKDFNIEKEAGGTAKPIVKTFTVAVTSNTLKIHFYWGGKGTTGIPTRGSYGPLISAISVDPNFTPPSSEKKKSYIILVAGIMVAAVFLVLLLLVIMRRKGYLGGNISVDKELRGVDLQTGLFTLRQMKAATRNFDPAYKIGEGGFGSVYKGLLSDGTVIAVKQLSSKSKQGNREFVNEIGMISGLQHPNLVKLFGCCVESNQLLLIYEYMENNCLARALFGKDPASRLQLDWPTRQKICLGIARGLVYLHEESRLKIVHRDIKTSNVLLDKNFNAKISDFGLAKLYEEENTHISTRIAGTVGYMAPEYAMRGHLTNKADVYSFGVVALEIVSGKSNTNYRPTEEFFYLLDWAYVLQERGSLLELVDPALGSEYSAEEAMLMLNVALLCTNASPTLRPTMSQVVSMLEGRTAVQDLLSDPGFSAMNSKYKAIRKHFWQHQTGTESMSTFNAVTDTFSSCETEENYPPTSTKLQ* 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01091 872 Gene3D Ribonuclease Inhibitor 112 272 IPR032675 -
Pte9g01091 872 Gene3D Phosphorylase Kinase; domain 1 507 609 - -
Pte9g01091 872 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 504 609 - -
Pte9g01091 872 Pfam Protein tyrosine and serine/threonine kinase 539 806 IPR001245 GO:0004672|GO:0006468
Pte9g01091 872 SUPERFAMILY Protein kinase-like (PK-like) 520 807 IPR011009 -
Pte9g01091 872 CDD STKc_IRAK 540 808 - -
Pte9g01091 872 Pfam Malectin domain 272 457 IPR021720 -
Pte9g01091 872 Gene3D - 273 461 - -
Pte9g01091 872 Gene3D Ribonuclease Inhibitor 1 111 IPR032675 -
Pte9g01091 872 Gene3D Transferase(Phosphotransferase) domain 1 610 818 - -
Pte9g01091 872 ProSiteProfiles Protein kinase domain profile. 534 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte9g01091 872 ProSitePatterns Protein kinases ATP-binding region signature. 540 562 IPR017441 GO:0005524
Pte9g01091 872 SUPERFAMILY L domain-like 2 219 - -
Pte9g01091 872 FunFam Putative LRR receptor-like serine/threonine-protein kinase 610 818 - -
Pte9g01091 872 ProSitePatterns Serine/Threonine protein kinases active-site signature. 657 669 IPR008271 GO:0004672|GO:0006468
Pte9g01091 872 Coils Coil 867 872 - -
Pte9g01091 872 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 270 462 - -
Pte9g01091 872 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 88 235 - -
Pte9g01091 872 Pfam Leucine rich repeat 140 197 IPR001611 GO:0005515
Pte9g01091 872 FunFam Leucine-rich repeat receptor protein kinase EMS1 1 84 - -
Pte9g01091 872 SMART serkin_6 534 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte9g01091 872 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 2 844 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01091 Pte-Chr9 32481718 32488719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01091 70 839 Receptor kinase-like Gene Family AT1G07650 66.839 0.0 1032
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pte9g01091 PK_Tyr_Ser-Thr 3.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01091 - - csin:114299438 1328.15