Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01087 ATGATCTCGAGTCGCTGTGCTGCCTGCAAGAATCAAAGGAGGAGATGCCCTTCTGACTGCATTTTCTCTCTTTATTTCCCTTCCAACGACCCCCATAGATTCAACTGTGTTCATAAAATATATGGTGCCAGTAATGTGGGAAGAATGCTTCAGGAAATCCCATACCATCTCAGATCACAAACTGCAGATTCATTGCATTATGAAGCACAATGTCGTTTACAAGATCCTGTATATGGCTGTGTTGGGATCATTACTCACTTGCACCAACAAATTGCTGATGTTGAAACTCAGTTAGCCAAAACCCAAGCTCAGATAGCACTTCATAATAATGGGAATGCACCTTCAAATTCAGATGCGCAACATGAACCAAATTCCAAGTATTGCTTTCAAGAGGGATCATCCAGTCTATCTCCATGGCTCCACTAA 426 0.4202 MISSRCAACKNQRRRCPSDCIFSLYFPSNDPHRFNCVHKIYGASNVGRMLQEIPYHLRSQTADSLHYEAQCRLQDPVYGCVGIITHLHQQIADVETQLAKTQAQIALHNNGNAPSNSDAQHEPNSKYCFQEGSSSLSPWLH* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01087 141 Coils Coil 84 104 - -
Pte9g01087 141 MobiDBLite consensus disorder prediction 109 141 - -
Pte9g01087 141 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 122 - -
Pte9g01087 141 Pfam Lateral organ boundaries (LOB) domain 5 102 IPR004883 -
Pte9g01087 141 ProSiteProfiles LOB domain profile. 4 105 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01087 Pte-Chr9 32469956 32472101 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01087 1 107 AS2 family AT3G26660 59.813 5.78e-46 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pte9g01087 LOB 1e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01087 - - mesc:110599778 179.489