Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01085 ATGGCCTGGACAAACACAGAAATCCTAACTTGCAAAGTACCACAAAGGGTGAGTCCCAAAACAGTTGAGCAAGCTGTGAATTCGCTTCTCAAATGGCGGGATTCCAAGTTACAGAGCGAAAAACCAAAACTTTTTGACCCAGTTGATGAGTTTGTCTACCTTATACTCACTCTCAAGAAAATCCCACCAAAGGGTCGAGTTAAACCTCATAAGATTCTCCTCCCTCATTCCCTTGCCTCTGAATTCTCCGAGCACTGCTTGATCATCGATGACAGATCAGATTCCGGTCTCACCAAAGAAGATGTACAGAAGAAGATCAAGGCCGAATGTATTCCTGTTGCTAAGGTTCTCAAGCTTTCTAAGCTAAAATCAAATTACCAAGCTTACGAGGCTAAGCGTAAGTTGTGTGATTCTTACAATATGTTTTTCGCGGATAGGAGAGTGATTCCGCTGTTGCCTAGGTTGATAGGTAAGAACTTTTTTAAGAAGAAGAAAGTTCCTATAGCTTTAGATTTGACGCACAAAAACTGGAAAGAGCAGATTGAGAAAGCTTGTCGTTCTGCTCTCTTGTTTCTGAGTACCGGTACTTGTGCTGTGATTAAAGTAGCCAAGCCTTCTATGGGGAAAGATGGGATTGTTGAGAATGTGGTTGCTGCTATTAATGGGGTTGTGGAACTCGTGCCTAAGAAGTGGAACAATGTTAGGTCACTTCATTTGAAGTTGTTGGAGTCGGTTTCGTTGCCTATCTATCAGGCGTTGCCTGATTATAAATTAAAGATTGAAGGTGTTAAGGCAAGGGAAGAGAGTTTTGAGGAGGAAGAAGATAAAGTGATCAGTGGGGATGAGGGGAAGAAGGTTGAAAAGGTACGCAAGAAGAAGGGAAGGATTCATGAAGTTAAATACATGGATAATAGTGTTGGTGAAGATGAATTAGGAGTTAGTGAAGATGTTGTTGGCCAGGAAGAGGATGATAATGATGTGAGGAATGGAGACACGCAAGAGGTTGAGCCAGGTGCTCTATTGGTGGAGAAGAAGAGGAAGAAGAAAACTAAAGACCAAGATGCCGCTCTTACTGAGATGAATGGATTGAAGAGGATGAAGAAGTCTAGTAGAGACAAGCACGAAGATGGTTCGCAAAACAAAAAGGATAAGTTGCCTAATAAAGAGAATAAGGATAGTGTTAGCAAGAGCAAGAAGCTGTTGACCAGTAAGAATGGAGATAATAATTTTGATAAGAAGAAGACCGGGAAGCCAGTAAATGAAGAAACAAAAGTGAAAGTCAAGAAAAGTAAGAAGTCGGCCTAG 1305 0.4146 MAWTNTEILTCKVPQRVSPKTVEQAVNSLLKWRDSKLQSEKPKLFDPVDEFVYLILTLKKIPPKGRVKPHKILLPHSLASEFSEHCLIIDDRSDSGLTKEDVQKKIKAECIPVAKVLKLSKLKSNYQAYEAKRKLCDSYNMFFADRRVIPLLPRLIGKNFFKKKKVPIALDLTHKNWKEQIEKACRSALLFLSTGTCAVIKVAKPSMGKDGIVENVVAAINGVVELVPKKWNNVRSLHLKLLESVSLPIYQALPDYKLKIEGVKAREESFEEEEDKVISGDEGKKVEKVRKKKGRIHEVKYMDNSVGEDELGVSEDVVGQEEDDNDVRNGDTQEVEPGALLVEKKRKKKTKDQDAALTEMNGLKRMKKSSRDKHEDGSQNKKDKLPNKENKDSVSKSKKLLTSKNGDNNFDKKKTGKPVNEETKVKVKKSKKSA* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01085 434 CDD Ribosomal_L1 22 249 IPR028364 -
Pte9g01085 434 MobiDBLite consensus disorder prediction 338 355 - -
Pte9g01085 434 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 25 244 - -
Pte9g01085 434 FunFam Ribosomal protein L1p/L10e family 95 186 - -
Pte9g01085 434 MobiDBLite consensus disorder prediction 364 398 - -
Pte9g01085 434 MobiDBLite consensus disorder prediction 405 428 - -
Pte9g01085 434 Gene3D - 190 247 - -
Pte9g01085 434 MobiDBLite consensus disorder prediction 318 434 - -
Pte9g01085 434 Pfam Ribosomal protein L1p/L10e family 30 245 IPR028364 -
Pte9g01085 434 SUPERFAMILY Ribosomal protein L1 41 250 IPR023674 -
Pte9g01085 434 Gene3D - 96 187 IPR016095 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01085 Pte-Chr9 32440382 32442305 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01085 138 240 Cytoplasmic Ribosomal Protein Gene Family AT2G27530 32.692 7.75e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01085 K14775 - qsa:O6P43_014803 481.485