Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01071 ATGGTGTGCAGATTTAACCAAGCTCAATCTTTGTTTCAGGCTATGGAGGCGGCAAATGAAGCTTCATCTTCTTTAACCTTAGCATCATCTAATTTGTCCAATGGGTGTAGTAATCACAGCAATCCATCTGCCCTTACCAGCAACGAAGCGGCAGTCAGCCTTGATAATTTGAGTTTGAATAAGCTCAGTGGGTGTCTTGAGAAGCTGTTGGTTGATGATGAGTATGACTACAGTGATGCCCAGATTGTTGCTGAGGGTATCGCTATCGGTGTTCATAGGTGTATACTGGCTTCAAGGAGCCAGTTTTTCCATGACCTTTTCAAGAAAGGGAATAATAGTTCAACACAGGAAGGTAAACCAAGGTACCTAATATCTGAATTGGTGCCTTGTGGGAAAGTTGGATATGAAGCCTTCAAAGTTTTCTTGCATTATTTGTATACTGGAAAGCTTAAGCCATCCCCTCCTGAAGTATCAACATGTGTTGATGAAACTTGTGTTCATGATGCTTGCGGCCCTGCTATCAATTATGCTGTTGAACTCATGTATGTTTCTGCGACTTTTCAGATGAAAGAGCTTGTCTTGCTTGTTCAGCGACGTCTACTTAATTTTATCGACAAGGCTCATGTTGAAGATGTGATCCCAATTCTTATTGTTGCCTTTCAGTGTCAGCTAAGCCAAGTCCTATCTCATTGCATCCAAAGAGTGGCAAGGTCTAATCTTGACGATGTGAACTTGGAAAAGGAACTCCCTAGTCAAGTTCTAAGTGACGTGAAATCTCTTAGAGTTCAATCACAATTAGAAGCCACATCTAGTGGAAATGAGGTAGAAGCTGTCCGTGAAAAAAATATTAGAAGAATACTCAAGGCATTGGATTCAGATGACGTCGAACTGGTTAAGCTTCTACTGAATGAATCAGATGTCACTTTGAATGATGCTTATACACTTCACTATGCCTGTGCATATTGTGACCCTAAAATTGTTAAAGAGGTGCTTAATCTAGGACTGGGTGATCCGAACCTCAAGAATCCTAGGGGATATACAGTCCTTCATGTTGCTGCAAGGAGAAAGGAGCCATCAGTTTTAGTAGCACTTCTAAGTAAAGGGGCAAGCGCTTTTGAGACCAACTTGGATGGACAAAATGCTGTTTCTCTCTGTCGTCAATTAACTAGACCCAAGGATTATAATGAGAAACCCATTCAGGGAAAAGAATCTAACAAAGGTCGTCTTTGCATCGACATCCTGGAGAGAGAGATGAAAAGGAGTTCAATTTCTGGAAACATATCAGACTCATCGCCATTAGTTGTTGATGATTTGCAAGTGAAGTTGGACTATCTTGAAAATAGAGTGGCATTTGCTCGGGTGATTTATCCAACCGAGGCACGGGTGGCAATGGAGATTGCAGATGCAAATTCAAGTTCATTCTACGACAGATTATCATCAAAGGGATCAAGTGGCAACTTAAGAGAGGTGGATTTAAATGAAGAGCCCTCACATCGAGCTGAAAGACTCCAGTCAAGACTTCGAGCACTCATTAAAACAGTCGAGACTGGCCGGCGTTACTTCCCAAATTGTTCAGAGGTGCTGGATAAGTTTGTAGAGGATGACATGCCAGACATCTTCTTCCTTGAAAAAGGCACTGCTGAGGAGCAAAGACTGAAGAAGATGCGGTTTACAGAACTCAAAGAAGAGGTACAAAAGGCATTCCACAAGGACATTGCTGAGAACAACCGTTCTGGCTTGTCAGCCTCCTCCTCATGCTCATCTGCACCTAAGGAAGGTCTTGGCCACAAGGGGCGGAAAAGGTCAAGTCGTGTCATATCATAA 1824 0.4249 MVCRFNQAQSLFQAMEAANEASSSLTLASSNLSNGCSNHSNPSALTSNEAAVSLDNLSLNKLSGCLEKLLVDDEYDYSDAQIVAEGIAIGVHRCILASRSQFFHDLFKKGNNSSTQEGKPRYLISELVPCGKVGYEAFKVFLHYLYTGKLKPSPPEVSTCVDETCVHDACGPAINYAVELMYVSATFQMKELVLLVQRRLLNFIDKAHVEDVIPILIVAFQCQLSQVLSHCIQRVARSNLDDVNLEKELPSQVLSDVKSLRVQSQLEATSSGNEVEAVREKNIRRILKALDSDDVELVKLLLNESDVTLNDAYTLHYACAYCDPKIVKEVLNLGLGDPNLKNPRGYTVLHVAARRKEPSVLVALLSKGASAFETNLDGQNAVSLCRQLTRPKDYNEKPIQGKESNKGRLCIDILEREMKRSSISGNISDSSPLVVDDLQVKLDYLENRVAFARVIYPTEARVAMEIADANSSSFYDRLSSKGSSGNLREVDLNEEPSHRAERLQSRLRALIKTVETGRRYFPNCSEVLDKFVEDDMPDIFFLEKGTAEEQRLKKMRFTELKEEVQKAFHKDIAENNRSGLSASSSCSSAPKEGLGHKGRKRSSRVIS* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01071 607 Pfam BTB/POZ domain 74 158 IPR000210 GO:0005515
Pte9g01071 607 FunFam regulatory protein NPR3-like 278 418 - -
Pte9g01071 607 SUPERFAMILY POZ domain 66 203 IPR011333 -
Pte9g01071 607 Pfam Ankyrin repeats (3 copies) 292 370 IPR002110 GO:0005515
Pte9g01071 607 SUPERFAMILY Ankyrin repeat 271 388 IPR036770 -
Pte9g01071 607 MobiDBLite consensus disorder prediction 576 590 - -
Pte9g01071 607 Gene3D Potassium Channel Kv1.1; Chain A 46 236 IPR011333 -
Pte9g01071 607 ProSiteProfiles BTB domain profile. 78 154 IPR000210 GO:0005515
Pte9g01071 607 ProSiteProfiles Ankyrin repeat region circular profile. 344 370 - -
Pte9g01071 607 PANTHER REGULATORY PROTEIN NPR3 33 597 IPR044292 GO:0009862|GO:2000022|GO:2000031
Pte9g01071 607 Pfam Domain of unknown function (DUF3420) 239 287 IPR024228 -
Pte9g01071 607 SMART BTB_4 78 204 IPR000210 GO:0005515
Pte9g01071 607 MobiDBLite consensus disorder prediction 574 607 - -
Pte9g01071 607 Gene3D - 277 418 IPR036770 -
Pte9g01071 607 FunFam Regulatory protein NPR3 52 236 - -
Pte9g01071 607 CDD BTB_POZ_NPR_plant 60 191 - -
Pte9g01071 607 ProSiteProfiles Ankyrin repeat profile. 344 376 IPR002110 GO:0005515
Pte9g01071 607 Pfam NPR1/NIM1 like defence protein C terminal 386 586 IPR021094 -
Pte9g01071 607 SMART ANK_2a 281 309 IPR002110 GO:0005515
Pte9g01071 607 SMART ANK_2a 310 340 IPR002110 GO:0005515
Pte9g01071 607 SMART ANK_2a 344 373 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01071 Pte-Chr9 32318486 32322304 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pte9g01071 NPR1_like_C 9e-83 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01071 K14508 - qsa:O6P43_014750 797.349