Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01069 ATGGAAGTGAGTATGACAGCTGAGGGTGGTACCAGCTTAGACAACAGGACGGATCGGCAGGATGAAGAAGAGGTTATGCTTCCAGGTTTCAGGTTTCATCCTACAGATGAAGAACTGGTTGGTTTTTATCTGAGGAGGAAGGTTGATAACAAGCCTATCAAGATTGAACTTATCAAACAGATTGACATCTACAAATATGATCCGTGGGATCTTCCAAAATCAAGCTCAGTGGGAGAAAAGGAATGGTATTTTTTCTGCATAAGAGGAAGGAAGTACAGAAACAGTATAAGGCCCAATAGGGTAACTGGCTCTGGATTTTGGAAAGCAACAGGAATTGATAAACCGATTTACAGTGGTGGAGGACCCCATGAATGCATTGGCTTGAAGAAATCCTTAGTGTATTACCGTGGTAGTGCTGGTAAAGGCACCAAAACTGATTGGATGATGCATGAGTTTCGTCTTCCTCCTAATGGCAGCAAAAGTACGAACCATGCTCAACCAGACATTGCTGATAGTACCATTCAAGAAGCTGTAAGCTTTAGCTTGTTTCCTTTGTTTTTGTTTTTCATTTGTTTTCAGGTGCTTGTTTTTTCATTGTATACACTTCCTTTCAAGTTCTCTCTAAGAACCGAAGAACAAAACAGAAATCAGATTGGAAACCCTTTTGCTTTCCCATTGAAAATTGTCTAA 690 0.4043 MEVSMTAEGGTSLDNRTDRQDEEEVMLPGFRFHPTDEELVGFYLRRKVDNKPIKIELIKQIDIYKYDPWDLPKSSSVGEKEWYFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIYSGGGPHECIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPPNGSKSTNHAQPDIADSTIQEAVSFSLFPLFLFFICFQVLVFSLYTLPFKFSLRTEEQNRNQIGNPFAFPLKIV* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01069 229 MobiDBLite consensus disorder prediction 1 21 - -
Pte9g01069 229 Pfam No apical meristem (NAM) protein 28 154 IPR003441 GO:0003677|GO:0006355
Pte9g01069 229 ProSiteProfiles NAC domain profile. 26 177 IPR003441 GO:0003677|GO:0006355
Pte9g01069 229 SUPERFAMILY NAC domain 22 164 IPR036093 GO:0003677|GO:0006355
Pte9g01069 229 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 23 160 - -
Pte9g01069 229 FunFam NAC domain-containing protein 35 35 185 - -
Pte9g01069 229 Gene3D NAC domain 35 179 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01069 Pte-Chr9 32274197 32275986 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01069 15 153 NAC Transcription Factor Family AT1G26870 72.662 1.10e-72 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte9g01069 NAM 2.2e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01069 - - gmx:100784323 281.952