Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01062 ATGACCAACTGTGTTCCAAATTGGGATTTTGAGAGTGATTCATGTATGGCAAATCTACAGAGGCCCCTGGGGGCAGACCAGGAACTTGTGGAGCTCCTATGGGAGAATGATGAGGTGGTTTTGCATAGCCATGGAAATCGAAAAATAAACGAACAATCTAAAGCTACGAGGCAAGAACCAAAACACGATCAACTTGCACAAAGGAGTATTAGTACATATGGAGGTCCAAGCAATTCGACTCAAGAAAACGAGACTATATCATGGATCCACTGTCCACTGGATGATTCATTTGAGAAGGACTTTGCTTCCAACTTCGTCCCGGAGCTGCAATCATGTGATGTTGAGGCTAATATGCCTCTCAAACACATTGAAGAAAGAACTACTAAGTTTGTTGATGGTCCTATTGTCCAAGAATTCTCAGGAGATGCTATGCCTATCCCCGGATTTCGATTCTCCGATCCGTTCAAGCACAATCAGAATTCACGTGGACTGGAAAAAGTTGTCGGATTTTCTCGTTTTAGGGCACACTTTAAGATTAAGGGTGCTTCAGGATCGTGTAATGGCGAATATGAAGACAAAGGTAACGTTTTTGATGCTCAGAATGAAGGAAAGGAGAATCAAGATAATGTTTTTGTTGCTCAGAATAAAGGAAAGCAGAGTCCAGCAATGACTTTAGGTTCAAGTCATTGTTGCAGCAATCAGTTCTCTCAGGATGTTGATATCAGCCGAGCATCAACCACTGCCATGGGGACTCATAATAATGTATCTGCCGACACATCAAAAAATGATATGCAGACAGTTCATGGTGACAGTGAGAACAAGAAGTCTGAGACACTTGAACGAGCTTTCATTTTCTCCTCAGGTTGCTCTGGTAGCAGTCATGGAAAAATACACTGCAAAAGGAAAGTAAGATCGGCAGAGGAATCAGAAGGTCCAAGTGAGGCTACAGAGGTCAAATCAGCAGCTGGAAACAAGTCAGCTCAAGGAGCAAGGTCTTGGAGGAAGAGTCGTACAGCTGAAGTTCATAATCTCTCAGAAAGAAGACGAAGAGATAGGATTAATAATAGGATGAGGGCATTGCAAGAACTCTTACCTCAGTCTAAAAAGAAAGATAAAGCATCTATGCTAGATGAAGTAATTGAGTACTTGAAGTCACTTCAGTTACAACTTAAGGTAATGTGGATGGGAACTGGAATGACACCAACAATGTATCCAGGAGTTCAGCACATGTCAAGAGTTGGAATGGGAATGACTACAACTTCTTTGCCTCCTTTTCTCAATCCTATGCAACTAGTTGAACAGTCTATACCTGTTGCTCAAATACCACATCAAGCTATGATGTGCCAAACCCCAGTTTTGCCTTTCGTTAATTACCAAAATCAGATGCAGAATCCTCCTTTTGCTGAGCAACATGCAATGTATGGGGTCGGCCATGGTCCCCAAGTAGCACAGCGTGGTCAAACAACGATTCCTCCTACAAATATATAG 1488 0.4234 MTNCVPNWDFESDSCMANLQRPLGADQELVELLWENDEVVLHSHGNRKINEQSKATRQEPKHDQLAQRSISTYGGPSNSTQENETISWIHCPLDDSFEKDFASNFVPELQSCDVEANMPLKHIEERTTKFVDGPIVQEFSGDAMPIPGFRFSDPFKHNQNSRGLEKVVGFSRFRAHFKIKGASGSCNGEYEDKGNVFDAQNEGKENQDNVFVAQNKGKQSPAMTLGSSHCCSNQFSQDVDISRASTTAMGTHNNVSADTSKNDMQTVHGDSENKKSETLERAFIFSSGCSGSSHGKIHCKRKVRSAEESEGPSEATEVKSAAGNKSAQGARSWRKSRTAEVHNLSERRRRDRINNRMRALQELLPQSKKKDKASMLDEVIEYLKSLQLQLKVMWMGTGMTPTMYPGVQHMSRVGMGMTTTSLPPFLNPMQLVEQSIPVAQIPHQAMMCQTPVLPFVNYQNQMQNPPFAEQHAMYGVGHGPQVAQRGQTTIPPTNI* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01062 495 MobiDBLite consensus disorder prediction 319 333 - -
Pte9g01062 495 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 337 386 IPR011598 GO:0046983
Pte9g01062 495 MobiDBLite consensus disorder prediction 303 339 - -
Pte9g01062 495 MobiDBLite consensus disorder prediction 250 264 - -
Pte9g01062 495 MobiDBLite consensus disorder prediction 45 64 - -
Pte9g01062 495 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 340 404 IPR036638 GO:0046983
Pte9g01062 495 MobiDBLite consensus disorder prediction 65 83 - -
Pte9g01062 495 Coils Coil 350 370 - -
Pte9g01062 495 MobiDBLite consensus disorder prediction 45 83 - -
Pte9g01062 495 FunFam Basic helix-loop-helix transcription factor 332 395 - -
Pte9g01062 495 SMART finulus 343 392 IPR011598 GO:0046983
Pte9g01062 495 Gene3D - 333 393 IPR036638 GO:0046983
Pte9g01062 495 PANTHER TRANSCRIPTION FACTOR PIF3 21 471 IPR044273 GO:0003700|GO:0006355
Pte9g01062 495 MobiDBLite consensus disorder prediction 250 275 - -
Pte9g01062 495 Pfam Helix-loop-helix DNA-binding domain 341 387 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01062 Pte-Chr9 32219098 32221564 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01062 1 98 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G59060 31.683 3.85e-08 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte9g01062 HLH 2.4e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01062 K16189 - pvy:116115059 379.022