Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01058 ATGAGACTCTCTTCATCTGGGTTCAATCAACAGGCCCAGGAAGGCGAAAAGAAATGCTTGAATTCTGAACTGTGGCATGCGTGTGCTGGTCCACTGGTGTCTTTGCCTCCTGTTGGGAGTCGCGTAGTCTACTTCCCTCAGGGTCACAGTGAGCAGGTGGCTGCTTCTACAAACAAGGAAGTGGATGCACATATTCCGAATTACCCTAATTTGCCACCACAGCTTATTTGTCAACTCCACAATGTGACTATGCATGCAGATGTTGAAACAGACGAAGTTTATGCTCAAATGACCTTGCAACCTCTGAGTCTGCAAGAGCAAAAGGATGTCTACTTGCTCCCTGCAGAATTGGGTTGTCCAAGCAAACAACCAACAAACTATTTCTGTAAAACACTTACTGCAAGTGATACTAGCACTCATGGAGGGTTCTCGGTTCCTCGACGAGCAGCTGAAAAAGTCTTTCCTCCTCTTGATTACTCGCAGCAGCCTCCTGCACAAGAACTTATTGCAAGAGATCTCCATGATAACGAATGGAAATTTAGACATATATTTCGAGGTCAGCCTAAAAGACATCTTCTCACTACTGGATGGAGTGTGTTTGTTAGTGCAAAGAGACTTGTTGCTGGTGATTCAGTTATTTTCATTTGGAATGATAAAAATCAATTACTCTTGGGCATTCGGCGTGCAAATCGACCCCAGACAGTCATGCCTTCATCAGTTCTATCCAGTGACAGTATGCACATTGGTCTTCTTGCTGCTGCTGCCCATGCAGCAGCTACCAACAGCCGCTTTACCATATTCTATAATCCAAGGGCAAGTCCCTCAGAGTTTTTAATTCCCTTGGCCAAGTATGTGAAAGCTGTCTATCATACACGGGTTTCCGTTGGGATGCGATTCAGAATGCTGTTTGAGACGGAAGAGTCAAGTGTCCGACGATACATGGGTACTATAACAGGTATTAGTGATTTAGATCCTGTTCGCTGGCCAAATTCACATTGGCGCTCTGTGAAGGTTGGCTGGGATGAATCCACTGCAGGGGAAAAGCAACCAAGAGTTTCATTGTGGGAGATTGAACCACTGACAACCTTCCCTATGTATCCATCTCCTTTCCCACTTAGGTTGAAGCGTCCTTGGCCATCAGGTCTCAAGGATGGTGATATGAGCCTTAATTCTCCATTGATGTGGCTACAAAGTGGGCTAGGAGATCAAGGACTTACTTCTTTAAACTTTCAGGGATTTGGGGTCACACCTTGGATGCGGCCTAGACTTGACACTTCATTGTCTGGTCTGCAGCCTGATGTATACCAAGCTATGGCTACTACTGCACTGCAAGAGATGAGGACGATTGATCCCTCCAAATGTTCTCCGCAATCTTTATTACAGTTTCAGCAAAGTATTCCTAATGCTCCTGTTTCTGTAATTCAGAGGCAAATGTTGCAGCAGACCCAATCACAAAATGCTTTACTTCAGAGCTTACAAGAAAATCATCTGCCTTCTCAGCCTGAACTGCTCCAGCACCAGCCACAGCGCTATCATCCATACAATGATCATCGGCTAGTGCAGCAACGACCATTATCTCAGCAGCTTCAGCATTCCCAGCAAATTCACAACGTGTCTGTTCAGCAGCAACTTCCAACTGTCATGTCATGTCTTTCTAACTTTGCATCAGCATCCCAGTCCCATTCCCCATCATTGCAGGCCATCACTTCACATAGCCAGCAACTGAGTTTCTCAGAAAGTGGCACGAATCTTATTTCTAATACTGAGGTCTCCCCCATACACAGTTTATTAGGATCATTGTCTCAGGATGGAGCATCACGCTTATTTAATATGAGTGGATCCAATCCCGAAATGTCGTCTGCTGCTTTATTGTCCAAGCAAATGTCTGCTGAAACTCAAATGCCATCTACTGTGTCCCAGTGTGTGCTGCCCCAGGTTGATCACTTGGATGCACCACAATCAAACGTATCTGAACTTGCTGGTTTACCTCCTTTTCCTGGAAAAGAGTTTCCCACATACCATGGTGCTTCTGATCCCCAAAGCAACCTCTTGTTTGGAGTTAACATTGATTCCTCCTCCCTTTTGCCACAGAACGGGACGCCGAACCTGAGAAATATCAGCAATGATTCTTTGTCAATGCCATTTGTTACATCTAACTTTGGCAACGCTACAGGAAGTGATTTTCCACTTAGTTCAGACATGACAACTTCAAGTTGTGTGGATGAATCTGGTTTCTTACAGTCATCTGAAAATGTTGATCAAGCATATACTTCCACTAGAACCTTCGTTAAGGTTCACAAGTCGGGGTCCTTTGGGAGATCACTGGATATTTCCAAGTTTAGCAGCTATGATGAGCTGCGCAGTGAGCTTGGTCGAATGTTTGGCCTTGAAGGCCAACTGGAGGACCCTCAGAGATCAGGCTGGCAGCTTGTATTTGTTGACCGGGAGAATGATGTTCTTCTCCTTGGTGATGACCCATGGCAGGAGTTTGTGAACAATGTATGGTATATCAAGATATTGTCCCCACTCGAGGTTCAACAGCTGGGCAAAGAAGTCCTTGCTCCTGCAACAACTTCTGCATCCAATCAAAAGCTTTCTACCATTGTCAATGCTTGTGATGATTATGTGAGTCGACAGGACTTCAGAAATTCCAGCAACGGGATTGCTTCTCTGAGCTCTTTCGACTATTAG 2691 0.4515 MRLSSSGFNQQAQEGEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSLQEQKDVYLLPAELGCPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFLIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPSGLKDGDMSLNSPLMWLQSGLGDQGLTSLNFQGFGVTPWMRPRLDTSLSGLQPDVYQAMATTALQEMRTIDPSKCSPQSLLQFQQSIPNAPVSVIQRQMLQQTQSQNALLQSLQENHLPSQPELLQHQPQRYHPYNDHRLVQQRPLSQQLQHSQQIHNVSVQQQLPTVMSCLSNFASASQSHSPSLQAITSHSQQLSFSESGTNLISNTEVSPIHSLLGSLSQDGASRLFNMSGSNPEMSSAALLSKQMSAETQMPSTVSQCVLPQVDHLDAPQSNVSELAGLPPFPGKEFPTYHGASDPQSNLLFGVNIDSSSLLPQNGTPNLRNISNDSLSMPFVTSNFGNATGSDFPLSSDMTTSSCVDESGFLQSSENVDQAYTSTRTFVKVHKSGSFGRSLDISKFSSYDELRSELGRMFGLEGQLEDPQRSGWQLVFVDRENDVLLLGDDPWQEFVNNVWYIKILSPLEVQQLGKEVLAPATTSASNQKLSTIVNACDDYVSRQDFRNSSNGIASLSSFDY* 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01058 896 Gene3D - 292 364 - -
Pte9g01058 896 ProSiteProfiles B3 DNA-binding domain profile. 128 230 IPR003340 GO:0003677
Pte9g01058 896 FunFam Auxin response factor 755 849 - -
Pte9g01058 896 Pfam AUX/IAA family 751 844 IPR033389 -
Pte9g01058 896 Gene3D - 755 849 - -
Pte9g01058 896 ProSiteProfiles PB1 domain profile. 760 844 IPR000270 GO:0005515
Pte9g01058 896 Pfam Auxin response factor 254 337 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Pte9g01058 896 SUPERFAMILY CAD & PB1 domains 755 834 - -
Pte9g01058 896 Gene3D - 126 229 IPR015300 -
Pte9g01058 896 SUPERFAMILY DNA-binding pseudobarrel domain 113 257 IPR015300 -
Pte9g01058 896 CDD B3_DNA 127 228 IPR003340 GO:0003677
Pte9g01058 896 SMART B3_2 128 230 IPR003340 GO:0003677
Pte9g01058 896 FunFam Auxin response factor 126 230 - -
Pte9g01058 896 Pfam B3 DNA binding domain 128 229 IPR003340 GO:0003677
Pte9g01058 896 FunFam Auxin response factor 292 364 - -
Pte9g01058 896 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 16 849 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01058 Pte-Chr9 32175609 32184204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01058 1 465 B3 DNA Binding Superfamily AT1G30330 86.765 0.0 827
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Pte9g01058 AUX_IAA 2.2e-07 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01058 - - zju:107416662 1471.83