Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01055 ATGATGAGTGTAATTCTGAAGAGGTTTTCTTCCACGGCCTCAAGGCGAACTCTATCCGCCTTGGCTTCGGTGGATTCCGTTCTACACAACTTACCGCTTCATTTCAATCCGGCTACTTCTGTGCTTCCCAGGAATACTGAACTTCTCGGTGAAATTAGATGTTTCTCTAGTTTGCTTGGTATGGCTAAGGGCGGTTCAGATGTTAGAGCACGAAGCTTTCACGCGGTATCTAGGCCGTTGAATTTTAGATCATCGTTAATTTCTCAAGCCGATTTCGCTACAGCACGCGAGTATTCATTTGATGAAGAGAAGGGATTGAAGGGAGATAGTGATGAAGGGCTTGATATCGCAAAGCTGGGAATTTCGCAGCAAATAGTTTCTGCTTTGAGCAAGAAAAACATCACGAAGCTCTTCCCAATTCAGAGAGCTGTGCTGGAGCCTGCAATGCAAGGGCGTGATATGATTGGTAGGGCCAGAACTGGAACAGGGAAAACTCTTGCTTTCGGTATACCCATTCTCGACAAGATTATTCGACACAATGCGACAAATGGGGAGGGTAAATATCCGCTTGCATTGGTTATGGCACCAACGAGGGAACTGGCCAATCAAGTTAAAAAGGAATTTTCGGAGTCTGCTCCTGAATTACTAACACTGTGTATTTATGGGGGTGTACCAATTGGAAACCAAATGAGGCAGCTCGACAGGGGTGCGGATGTAGTAGTTGGTACGCCTGGTCGACTTATTGATCTCATGAACAGAGGTGCACTGGTGTTGTCAGATGTTCAGTTTTTGGTTCTTGATGAAGCTGACCAGATGCTTCAAGTTGGCTTTCAAGAGGATGTTGAAAGAATCATGGACAGATTGCCTAGGCAGCGTCAGAGTTTAATGTTCTCTGCAACGATGCCATCTTGGATAAAAGATCTTTCCCGCAAGTACCTTAGAGATCCATTAATTATTGACCTTGTTGGAGACTCTGATCAGAAGTTGGCAGATGGAATTTCTCTATACTCTATCATGTCTGACACATATAGAAAAGCATCTATAATTGAACCTCTTGTAACAGAGCATGCAAAGGGAGGAAAATGTATAGTTTTCACTCAAACAAAACGTGATGCTGATCGGTTATCTCATGCTTTGGAGGGGAAGCTCAAATGCCAGGCCTTGCATGGGGATATCTCACAAAATCAGAGAGAGAGAACTCTTTCTGGTTTCCGAGAAGGTTACTTCAATGTTTTAGTTGCGACTGATGTTGCTGCCCGTGGGCTTGATGTACCTAACGTTGATCTTGTGATACACTATGATCTTCCAAATTCTTCGGAAATCTTTATTCATAGGTCTGGGCGAACAGGTCGTGCTGGGAAGTCAGGAACTGCTATCCTTATACATTCACAAGATCAAACAAAGACTGCTAGGCTGATTGAAAGGGATGTTGGTCGCAGGTTTAATGAGCTTCCAAAGATAAGTGTTGAAGGTGGGGCTCTAGACATGTTCAGTGATATGGGTGGTGGTGGGCGATTTGGCTCAGGTGGTATGAGGGAAAGGGGCTCTGGTCGGTATGGTGGTCAAAGGGAACAGGGATTTGGCCGAAGTGGGGGCTATGGAAATTCTGGGTTTGGCCGAAGTGGGGGCTATGGCGATTCTGGGTTTGGCCGTAGTGGGGGCTATGGCGATTCTGGGTTTGGCCGTAGCGGGGGCTATGGCGATTCTGGGTTTGGCAGAAGCGGGAGCTATGGCGATTCTGGGTCTGGCAGAAGTGGGAGCTATGGGAGTTCTGGATCTGGCAGAAGTGGGAGCTACGGTAGTTCTGGATTTGGTAACTCTTCAAGCTCTGGTCGTTTTAGTTCTTTTAGTGGTACTAGTTCAAGCCAGTCAGGAAGTAGTTTTGGTGCCAATCATTTGGGCCAATCAAGTAGATTTGGTCAGCAAGGTGGTTCTTGGGAACCTAAGGGTGCAGAACGATCTGGTGGGTTTGATAGTTTTGGATCAGGGCGTCGTGCAGGATTTGGGGACCTGGGAACAAGTCAAGGCAGTAGTTTTGGTAAACGGTTTGGTGATGGCCGCACAGATGGTCAGGATGATGAATCTTTCTAA 2091 0.4639 MMSVILKRFSSTASRRTLSALASVDSVLHNLPLHFNPATSVLPRNTELLGEIRCFSSLLGMAKGGSDVRARSFHAVSRPLNFRSSLISQADFATAREYSFDEEKGLKGDSDEGLDIAKLGISQQIVSALSKKNITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIRHNATNGEGKYPLALVMAPTRELANQVKKEFSESAPELLTLCIYGGVPIGNQMRQLDRGADVVVGTPGRLIDLMNRGALVLSDVQFLVLDEADQMLQVGFQEDVERIMDRLPRQRQSLMFSATMPSWIKDLSRKYLRDPLIIDLVGDSDQKLADGISLYSIMSDTYRKASIIEPLVTEHAKGGKCIVFTQTKRDADRLSHALEGKLKCQALHGDISQNQRERTLSGFREGYFNVLVATDVAARGLDVPNVDLVIHYDLPNSSEIFIHRSGRTGRAGKSGTAILIHSQDQTKTARLIERDVGRRFNELPKISVEGGALDMFSDMGGGGRFGSGGMRERGSGRYGGQREQGFGRSGGYGNSGFGRSGGYGDSGFGRSGGYGDSGFGRSGGYGDSGFGRSGSYGDSGSGRSGSYGSSGSGRSGSYGSSGFGNSSSSGRFSSFSGTSSSQSGSSFGANHLGQSSRFGQQGGSWEPKGAERSGGFDSFGSGRRAGFGDLGTSQGSSFGKRFGDGRTDGQDDESF* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01055 696 CDD SF2_C_DEAD 333 461 - -
Pte9g01055 696 MobiDBLite consensus disorder prediction 577 643 - -
Pte9g01055 696 SMART ultradead3 133 336 IPR014001 -
Pte9g01055 696 MobiDBLite consensus disorder prediction 504 535 - -
Pte9g01055 696 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 145 319 IPR014001 -
Pte9g01055 696 MobiDBLite consensus disorder prediction 577 696 - -
Pte9g01055 696 Pfam DEAD/DEAH box helicase 138 308 IPR011545 GO:0003676|GO:0005524
Pte9g01055 696 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 474 IPR027417 -
Pte9g01055 696 CDD DEADc 125 320 - -
Pte9g01055 696 Pfam Helicase conserved C-terminal domain 346 453 IPR001650 -
Pte9g01055 696 Gene3D - 115 323 IPR027417 -
Pte9g01055 696 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 348 492 IPR001650 -
Pte9g01055 696 SMART helicmild6 373 453 IPR001650 -
Pte9g01055 696 Gene3D - 336 494 IPR027417 -
Pte9g01055 696 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 100 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01055 Pte-Chr9 32153834 32157720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01055 119 485 Eukaryotic Initiation Factors Gene Family AT3G19760 32.440 3.31e-60 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01055 - - qsa:O6P43_014734 699.893