Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01042 ATGGTGAGGAAGAGGATGGCCTCCGAGATGGAGCTTCATGCCAGCCCCATGGCCATGGCCACGAACGGCACTCATGGTGCTTCTGCTGTTACCAGCAGATTTTCCAGTCCAAATATAATGGTGGGGTGTTCGGAAATCGATCGATACGTTGCTGCAAATCACGACCATAGTTCCAATTCCAACAACAATCATCGCCATCATCCTGCTGATCATCACCATCAATGTTCTCTTTCAACTGACAACAGTAGTCTTAGCCTGAACCCTAGTCCTGGTCACTGTCCTACTACAGACCCCACCATAAAGGTCCCCCATAACTACTCCACTCCTCAGCTCTTAGCTTGTTTAACGAATTTGAACACTTTGACAACCTCAGGTGTGGGGTCTTGTGGTTATTATTTATCTTCTTCGTATGCAAATTCTACAAATCACTTCAACCATATTAATGGTGTTTGTGGTGGAGAAGACCTCTCGCTTCATCCTCATCTTGAATTACAAAACCAGTCTCAAACTCAGAGCTGCCGGAGCCAACTGACCCCGGCAGTGTGTGGCTTCTCCGGTCTTCCTTTGTTTCCATCTCAAAGAACAAGTGCTACCCCAGATAGTACTGATCTCGGTGGCGACGGCGGCACTGCTTCCGTCGTCAACATTAGCAGCACCGTTGCTTCTTGTCCAACCGAGCCAACGTTGACAGCAACAGATAGTACTGCTGGTGGGTTTAGTAGTTCGGTGTCCATGGACGACGGAGGCGCCTCTGCTACAGCTTGGATCGATGGGATAATCAAGGACCTCATACACAGTTCTGCTTCTGTCTCAATTCCTCAGCTCATAAACAACGTTCGGGAGATAATCTATCCATGCAATCCTAACCTCGCCATCCTCTTCGAATACAGACTTCGCTCACTTTGCTTTCCCACTACATGTTCTACTGAAACTGCAACTGCAGCTTCCCCCCTCACAAACACAAACTATCCCATCGAGCAAAACCTAAGGAGAAGAATGGAAGAGCAGCCTGTTGGGGCAGGTATGGGATTGAGGCACCGGTCATCACATCAGCAGCCAGTTTCAAATATACATCTACCTGCGGTTTCTGATTCTCAAGCCATACTGAACCAGATGAACTCGAGCTGGGGTCTAATTTTAGCTTCATCTCTTGCTACAGAAACAAACAGTAATCAATCAATGGTTACACCTCCACAGCCGCAGCTACTGCCGTGTCCAAATCAACAAGAGCGTGCGGCACCGGTGCAACCCCAGCAGCATACTCAAGATAAAGAACAAGAAGAAGACTCTTTGCTACCTTCGATGACGACGACTGCAGCTCCGCCGTCTTCAGAAGAAACTGAAATGACAATCCACACGCGGAAGAATGAAATGATGGAGGAGATGAAACAGCAAAAGAGAGACGAAGAAGGTCTACACCTTCTGACACTGCTACTGCAATGTGCGGAGGCTGTCTCGTCGGACAACCTCGAAGAAGCCAACAAGATGTTGTTGGAGATTTCACAACTCTCCACTCCATACGGCACCTCAGCTCAGCGAGTGGCGGCCTACTTCTCCGAAGCCATATCAGCCAGACTGGTGAGCTCGTGTTTGGGGATATACGCAGCTCTGCCTTCTTTGCCACTCAGCTATACGCAGAAAATGGCTTCAGCATTTCAAGTATTCAATGGGATCAGCCCATTCGTGAAGTTTTCGCACTTCACTGCAAATCAAGCTATACAAGAAGCTTTTGAGAGGGAGGAGAGGGTGCATGTGATAGACCTCGACATCATGCAGGGACTGCAGTGGCCTGGTCTCTTTCACATTTTGGCTTCCAGACCTGGCGGGCCACCATATGTACGGCTTACTGGGCTGGGGTCCTCCATGGAAGCCTTGGAGGCTACCGGAAAGCGGCTATCTGATTTTGCTGACAAGCTAGGGTTGCCTTTTGAGTTTGTTCCGGTGGCAGAGAAAATTGGCAATCTGGATCCTGAGAGACTGAATGTGACGAAATCGGAAGTTGTTGCTGTTCACTGGTTACAACATTCCTTGTACGATGTCACTGGTTCAGATCAAAATACACTCTGGCTTTTGCAGAGACTGGCACCCAAAGTGGTGACTGTGGTGGAGCAGGATCTAAGCCATGCAGGCTCATTCCTAGGCAGGTTTGTGGAAGCCATCCACTACTACTCGGCCCTATTCGATTCCCTCGGAGCAAGCTATGGAGAAGAGAGTGAAGAACGCCATGTAGTAGAACAGCAACTCCTCTCCAGAGAGATTCGCAATGTGCTTGCAGTTGGAGGACCTTCGAGGACTGGAGATCTCAAGTTTCACAACTGGAGGGAGAAGCTTCAGCAATCTGGGTTCAAAGGCATCTCTCTGCTGGCAATGCTGCTACGCAGGCAACACTTTTGCTCGGTATGTTCCCTTCAGATGGGTACACCTTGGTGGAAGACAATGGAGCTCTTAAGCTTGGTTGGAAAGACCTTTGCTTGCTTACTGCTACTGCATGGAGACCCTCTTTTCACTCAGTCGCAACAAACACCATTCATTCAGCTCATCGTTGATGTGTTTGCCTTTAACCATATAGATTATTGTTTGGTTACTGGTTTAATTTCTTCTTGCTAG 2607 0.4852 MVRKRMASEMELHASPMAMATNGTHGASAVTSRFSSPNIMVGCSEIDRYVAANHDHSSNSNNNHRHHPADHHHQCSLSTDNSSLSLNPSPGHCPTTDPTIKVPHNYSTPQLLACLTNLNTLTTSGVGSCGYYLSSSYANSTNHFNHINGVCGGEDLSLHPHLELQNQSQTQSCRSQLTPAVCGFSGLPLFPSQRTSATPDSTDLGGDGGTASVVNISSTVASCPTEPTLTATDSTAGGFSSSVSMDDGGASATAWIDGIIKDLIHSSASVSIPQLINNVREIIYPCNPNLAILFEYRLRSLCFPTTCSTETATAASPLTNTNYPIEQNLRRRMEEQPVGAGMGLRHRSSHQQPVSNIHLPAVSDSQAILNQMNSSWGLILASSLATETNSNQSMVTPPQPQLLPCPNQQERAAPVQPQQHTQDKEQEEDSLLPSMTTTAAPPSSEETEMTIHTRKNEMMEEMKQQKRDEEGLHLLTLLLQCAEAVSSDNLEEANKMLLEISQLSTPYGTSAQRVAAYFSEAISARLVSSCLGIYAALPSLPLSYTQKMASAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHVIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGSSMEALEATGKRLSDFADKLGLPFEFVPVAEKIGNLDPERLNVTKSEVVAVHWLQHSLYDVTGSDQNTLWLLQRLAPKVVTVVEQDLSHAGSFLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLSREIRNVLAVGGPSRTGDLKFHNWREKLQQSGFKGISLLAMLLRRQHFCSVCSLQMGTPWWKTMELLSLVGKTFACLLLLHGDPLFTQSQQTPFIQLIVDVFAFNHIDYCLVTGLISSC* 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01042 868 MobiDBLite consensus disorder prediction 431 447 - -
Pte9g01042 868 MobiDBLite consensus disorder prediction 390 449 - -
Pte9g01042 868 MobiDBLite consensus disorder prediction 54 92 - -
Pte9g01042 868 ProSiteProfiles GRAS family profile. 465 841 IPR005202 -
Pte9g01042 868 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 441 789 IPR005202 -
Pte9g01042 868 MobiDBLite consensus disorder prediction 75 92 - -
Pte9g01042 868 Pfam GRAS domain family 475 787 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01042 Pte-Chr9 31979764 31983046 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01042 436 787 GRAS Transcription Factor Family AT3G54220 81.717 0.0 590
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte9g01042 GRAS 1.7e-107 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01042 - - qsa:O6P43_016422 756.518