Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01040 ATGACTTTCACAATAGATAGAACTGGAGAGAATATGGTGTTCACTGTGGAGTCACTGAAGTCAGTGCCTGCACCTTTCCTCACTAAGACATATCAGTTAGTCGATGACCATCTCACTGATCACATTGTGTCTTGGGGTGAAGATGAAACTACCTTTGTTGTATGGCGGCCACCTGAATTTTCCAGAGATCTATTGCCCAACTATTTCAAGCACAATAACTTCTCAAGCTTTGTCAGACAACTCAACACCTATGGTTTCAAAAAAATTGTTGCTGATAGGTGGGAGTTTGCAAATGAGTACTTCAGAAAAGGAGCAAAGCATCTTCTTTCTGAAATTCACAGAAGAAAAGCCCCTCAACACAATCAACTCCATCAATACAATGATCACCAACCATCACAGTTTCTTCAACCAGATGACCAAAACCTGTGTTGGATTGACAATCCATTACCATCTCCAACCTCAACCTCAGATATCCTCACTGCATTGTCTGAAGACAACCAAAGACTAAGAAGGAAAAACCTAATGCTCCTATCAGAACTCTCCCACATGAAGAGTCTCTACAATGACATAATCTACTTCATCCAAAACCATGTACAACCTATGCCTTGTGAACAAAGAGGTGGCAATGCTGTTGTTCCAAAGCTCATAGAGTTGGATTCAGATCAAACTGATGTTGCTGCTCAAACTACAAAATATCGTTCAGTAAATTCAGCTGAGGATTCAAACAACACTCTCAAGCTCTTTGGTGTTCCTCTATGTGGAAAGAAAAGATCTCACTCTGACAAGATGAATAATCGACAGCAACTGATCACTAGGGCCTTCGTTGATGACTGA 834 0.4077 MTFTIDRTGENMVFTVESLKSVPAPFLTKTYQLVDDHLTDHIVSWGEDETTFVVWRPPEFSRDLLPNYFKHNNFSSFVRQLNTYGFKKIVADRWEFANEYFRKGAKHLLSEIHRRKAPQHNQLHQYNDHQPSQFLQPDDQNLCWIDNPLPSPTSTSDILTALSEDNQRLRRKNLMLLSELSHMKSLYNDIIYFIQNHVQPMPCEQRGGNAVVPKLIELDSDQTDVAAQTTKYRSVNSAEDSNNTLKLFGVPLCGKKRSHSDKMNNRQQLITRAFVDD* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01040 277 Pfam HSF-type DNA-binding 26 115 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte9g01040 277 FunFam Heat stress transcription factor B-4 18 116 - -
Pte9g01040 277 SUPERFAMILY "Winged helix" DNA-binding domain 23 115 IPR036390 -
Pte9g01040 277 ProSitePatterns HSF-type DNA-binding domain signature. 65 89 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte9g01040 277 Gene3D - 18 116 IPR036388 -
Pte9g01040 277 PRINTS Heat shock factor (HSF) domain signature 64 76 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte9g01040 277 PRINTS Heat shock factor (HSF) domain signature 77 89 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte9g01040 277 PRINTS Heat shock factor (HSF) domain signature 26 49 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte9g01040 277 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 20 207 IPR027725 -
Pte9g01040 277 SMART hsfneu3 22 115 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01040 Pte-Chr9 31953474 31954593 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01040 20 201 HSF AT1G46264 60.386 2.17e-83 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Pte9g01040 HSF_DNA-bind 2.3e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01040 K09419 - qsa:O6P43_014695 395.201