Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01033 ATGGATAAAGCAAATATCAAGGATTATGAGACTTATTACTGGCAAAACAGACATCGATCCATCACACAGACAAAACTTCTCAAGAGCATGACTGAGAAAGGAAAGAGAGGGAAAAAGTTGAAATTCAAGTTGAGGGAAACGACCCAAGGTCTCTCTGAGTTTGGTAACATGACTTTCACAATAGATAGAACTGGAGAGAATATGGTGTTCACTGTGGAGTCACTGAAGTCAGTGCCTGCACCTTTCCTCACTAAGACATATCAGTTAGTCGATGACCATCTCACTGATCACATTGTGTCTTGGGGTGAAGATGAAACTACCTTTGTTGTATGGCGGCCACCTGAATTTTCCAGAGATCTATTGCCCAACTATTTCAAGCACAATAACTTCTCAAGCTTTGTCAGACAACTCAACACCTATGGTTTCAAAAAAATTGTTGCTGATAGGTGGGAGTTTGCAAATGAGTACTTCAGAAAAGGAGCAAAGCATCTTCTTTCTGAAATTCACAGAAGAAAAGCCCCTCAACACAATCAACTCCATCAATACAATGATCACCAACCATCACAGTTTCTTCAACCAGATGACCAAAACCTGTGTTGGATTGACAATCCATTACCATCTCCAACCTCAACCTCAGATATCCTCACTGCATTGTCTGAAGACAACCAAAGACTAAGAAGGAAAAACCTAATGCTCCTATCAGAACTCTCCCACATGAAGAGTCTCTACAATGACATAATCTACTTCATCCAAAACCATGTACAACCTATGCCTTGTGAACAAAGAGGTGGCAATGCTGTTGTTCCAAAGCTCATAGAGTTGGATTCAGATCAAACTGATGTTGCTGCTCAAACTACAAAATATCGTTCAGTAAATTCAGCTGAGGATTCAAACAACACTCTCAAGCTCTTTGGTGTTCCTCTATGTGGAAAGAAAAGATCTCACTCTGACAAGATGAATAATCGACAGCAACTGATCACTAGGGCCTTCGTTGATGACTGA 1002 0.4052 MDKANIKDYETYYWQNRHRSITQTKLLKSMTEKGKRGKKLKFKLRETTQGLSEFGNMTFTIDRTGENMVFTVESLKSVPAPFLTKTYQLVDDHLTDHIVSWGEDETTFVVWRPPEFSRDLLPNYFKHNNFSSFVRQLNTYGFKKIVADRWEFANEYFRKGAKHLLSEIHRRKAPQHNQLHQYNDHQPSQFLQPDDQNLCWIDNPLPSPTSTSDILTALSEDNQRLRRKNLMLLSELSHMKSLYNDIIYFIQNHVQPMPCEQRGGNAVVPKLIELDSDQTDVAAQTTKYRSVNSAEDSNNTLKLFGVPLCGKKRSHSDKMNNRQQLITRAFVDD* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01033 333 FunFam Heat stress transcription factor B-4 74 172 - -
Pte9g01033 333 Gene3D - 74 172 IPR036388 -
Pte9g01033 333 PRINTS Heat shock factor (HSF) domain signature 82 105 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte9g01033 333 PRINTS Heat shock factor (HSF) domain signature 120 132 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte9g01033 333 PRINTS Heat shock factor (HSF) domain signature 133 145 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte9g01033 333 ProSitePatterns HSF-type DNA-binding domain signature. 121 145 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte9g01033 333 Pfam HSF-type DNA-binding 82 171 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte9g01033 333 SUPERFAMILY "Winged helix" DNA-binding domain 79 171 IPR036390 -
Pte9g01033 333 SMART hsfneu3 78 171 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte9g01033 333 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 76 262 IPR027725 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01033 Pte-Chr9 31821605 31823297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01033 76 257 HSF AT1G46264 61.353 2.62e-83 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Pte9g01033 HSF_DNA-bind 3.2e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01033 K09419 - qsa:O6P43_014695 395.201