Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01014 ATGGCAGCAGGAACGACAGCAAGAACCAACAGGAGCTTTGGAGTTTTCGAGAAGAACAACCCAGAAAACCAACAGCTACAACAACAAAATGCCCGAGCAGTTTCTGAGTCTTCGGATGAAGACCGGGGCAACACAAAGCCTGTACGTACCATCATCAACAAGCTTGTCAAGCATTCCCTCACTGAATTGCGTTGCTCGAGAAAGGTGGTGAGGATATCTGTCACCGACTGTTATGCCACCGACTCATCGAGCGACGAGGAGGATGTTATTTCGGACAAGAAGGAAGAGCGAGAACGAGGAGAGGAAGAAACAACCTCTGGTGGGTCTGGGTCGGGCGGTGCTGGCGGGAACAAATTTCGTCAACCCGCTACCAGAGTGACGAAAGTTGTGAATGAGATAACTATTGAGGAGTGTTCGAAAAAAGGTGCTGGAAAGAGTTCTATGAATGATCGGAGCTTGAAGAGGTTTCGTGGGGTACGCCAAAGGCCGTGGGGTAGATGGGCCGCCGAGATAAGGGAGCCAACTGGAAAGAGGCTTTGGCTAGGGACATATGACACAGCTGAAGAAGCTGCTGCGGTTTATGATAAGGCTTCTATAGAGTTCAGAGGACCCAATGCTTTTACCAATTTCCTCAAACCTCCTGAGGCTATGGCTTGA 657 0.4977 MAAGTTARTNRSFGVFEKNNPENQQLQQQNARAVSESSDEDRGNTKPVRTIINKLVKHSLTELRCSRKVVRISVTDCYATDSSSDEEDVISDKKEERERGEEETTSGGSGSGGAGGNKFRQPATRVTKVVNEITIEECSKKGAGKSSMNDRSLKRFRGVRQRPWGRWAAEIREPTGKRLWLGTYDTAEEAAAVYDKASIEFRGPNAFTNFLKPPEAMA* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01014 218 SMART rav1_2 155 217 IPR001471 GO:0003700|GO:0006355
Pte9g01014 218 MobiDBLite consensus disorder prediction 81 122 - -
Pte9g01014 218 Pfam AP2 domain 155 203 IPR001471 GO:0003700|GO:0006355
Pte9g01014 218 SUPERFAMILY DNA-binding domain 155 210 IPR016177 GO:0003677
Pte9g01014 218 PRINTS Ethylene responsive element binding protein signature 156 167 IPR001471 GO:0003700|GO:0006355
Pte9g01014 218 PRINTS Ethylene responsive element binding protein signature 177 193 IPR001471 GO:0003700|GO:0006355
Pte9g01014 218 MobiDBLite consensus disorder prediction 1 34 - -
Pte9g01014 218 MobiDBLite consensus disorder prediction 1 46 - -
Pte9g01014 218 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 68 212 - -
Pte9g01014 218 ProSiteProfiles AP2/ERF domain profile. 155 211 IPR001471 GO:0003700|GO:0006355
Pte9g01014 218 MobiDBLite consensus disorder prediction 86 104 - -
Pte9g01014 218 CDD AP2 154 210 IPR001471 GO:0003700|GO:0006355
Pte9g01014 218 FunFam Ethylene-responsive transcription factor 2 154 212 - -
Pte9g01014 218 Gene3D AP2/ERF domain 154 212 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01014 Pte-Chr9 31591415 31595226 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01014 49 215 AP2-EREBP Transcription Factor Family AT4G27950 42.286 2.09e-34 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte9g01014 AP2 3.7e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01014 - - pop:7472720 125.561