Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pte9g01013 | ATGGCAATTACCTTCACAGATCTCCATACTGATTCCGGTCTCAAATCTCTTGAAGCCCACCTTTCTGGGAAAACATATGTTTCTGGGGACCAAGTAACTAAGGATGATATTACTGTATATGCAGCCGTTGTGGAGAAGCCAGGAGACGCTTTTCCCAATGCAAGCAAGTGGTATGAGGCCTTATCTTCAATTCTTGCCTCAAGCTTCCCTGGTAAAGCTGTAGGTGTAAAAGTCAGTGGTAAAGCTGTTCCAGCTGAAGCTGCTCCTGCTGCTGCAGCGAAGGCTGTTCCTGCTGGAGATGATGACGATGACCTTGATCTCTTTGGTGATGAGACTGAGGAGGATAAGAAGGCAGCAGAAGAGAGAGAAGCTGCTAAGAAAGCATCCTCCAAGAAGAAAGAGAGTGGAAAGTCTTCTGTTCTTATGGATATCAAGCCTTGGGATGATGAAACAGATATGAAGAAGCTAGAAGAGGCTGTCCGTTCTATTGAAATGCCTGGTCTTTTTTGGGGAGCATCTAAATTGGTTCCAGTCGGTTACGGGATCAAGAAGTTGCAGATCATGCTCACCATTGTGGATGATTTGGTATCCGTTGATTCTCTGATTGAGGAGCATCTTACTGTCGAACCATGCAATGAGCATGTTCAGAGCTGTGACATTGTTGCATTCAACAAGATTTAA | 681 | 0.4479 | MAITFTDLHTDSGLKSLEAHLSGKTYVSGDQVTKDDITVYAAVVEKPGDAFPNASKWYEALSSILASSFPGKAVGVKVSGKAVPAEAAPAAAAKAVPAGDDDDDLDLFGDETEEDKKAAEEREAAKKASSKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSIEMPGLFWGASKLVPVGYGIKKLQIMLTIVDDLVSVDSLIEEHLTVEPCNEHVQSCDIVAFNKI* | 227 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pte9g01013 | 226 | SUPERFAMILY | GST C-terminal domain-like | 11 | 63 | IPR036282 | - | |
| Pte9g01013 | 226 | ProSitePatterns | Elongation factor 1 beta/beta'/delta chain signature 2. | 215 | 226 | IPR001326 | GO:0003746|GO:0005853|GO:0006414 | |
| Pte9g01013 | 226 | SUPERFAMILY | eEF-1beta-like | 134 | 226 | IPR036219 | - | |
| Pte9g01013 | 226 | SMART | EF1_GNE_2 | 137 | 226 | IPR014038 | GO:0003746|GO:0006414 | |
| Pte9g01013 | 226 | Gene3D | - | 130 | 226 | IPR014717 | - | |
| Pte9g01013 | 226 | CDD | EF1B | 140 | 226 | IPR014038 | GO:0003746|GO:0006414 | |
| Pte9g01013 | 226 | PANTHER | EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER | 8 | 226 | - | - | |
| Pte9g01013 | 226 | Gene3D | - | 6 | 68 | - | - | |
| Pte9g01013 | 226 | FunFam | Elongation factor 1-beta 1 like | 131 | 226 | - | - | |
| Pte9g01013 | 226 | MobiDBLite | consensus disorder prediction | 113 | 139 | - | - | |
| Pte9g01013 | 226 | ProSitePatterns | Elongation factor 1 beta/beta'/delta chain signature 1. | 101 | 109 | IPR001326 | GO:0003746|GO:0005853|GO:0006414 | |
| Pte9g01013 | 226 | Pfam | EF-1 guanine nucleotide exchange domain | 139 | 226 | IPR014038 | GO:0003746|GO:0006414 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pte9g01013 | Pte-Chr9 | 31577276 | 31579953 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pte9g01013 | 1 | 227 | Eukaryotic Initiation Factors Gene Family | AT5G12110 | 71.616 | 1.55e-107 | 307 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pte9g01013 | K03232 | - | pvy:116130992 | 295.819 |