Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01011 ATGATGGATTTGAGGGAGGACAAGAAAATGTCCAAGGGTCACAGATCTTCATTGTCTGTTGAAGAAGCAAAAGGCAGGAAAAACTTAGGATGTGAGGTTCATCTGAAGAAAGGTCCTTGGACATCTGCAGAAGATGCAATTTTGGTAGAATATGTCAAAAAGCATGGGGAGGGTAACTGGAATGCTGTCCAGAAGCACTCAGGGCTTGCCAGGTGTGGGAAAAGTTGCCGTCTGCGATGGGCAAACCATTTGAGACCAGATTTAAAGAAGGGTGCATTTACTCCGGAGGAGGAGGATCGTATTGTTGAACTCCATGCCAAATTTGGAAATAAATGGGCTAGAATGGCAGCTGAGTTGCCTGGACGAACAGATAATGAGATTAAGAACTTCTGGAATACAAGGATCAAGAAAATGCAACGAGCTGGTTTACCACTCTATCCTGCTGAGGTGTGTCTACGAGTGTTGAATCAAGAAAACCATAATATGGGTGCCATAGTAGATCCAGAAAAGAAGCACCATGATCATTTGCTGGCAGAGAACTGTGACATCCCAGAAGTGGAATTTAAAAGCTTAAACTTTTCTCAAGGGTACCTGAATTACACGCCAACAGCTTTTAATGTGCCGGAAAGCAGCACGCTCAAACAGTTTGCAGACTCAAATCATAGTTACAATCCCATGCTTACAGTTTTGCACCCTCCAAAGCGCTTTCGAGAATCAGATACCTTTTACCATTATTTGGATGGTAGTCTCAGCAACGATATCCCACTATCTAATCAGTACGAGGATTGCACTGATGAGAATTTAATTGATGTCTATTCAGACACATCTCAGTTTATTGTCAGTGACCCTCTTGGTAGCCATGCCTTTCCAAATGGCAATTACTCTTCTTCTGAGCCCATAAGTATGGCCATGAAGTTGGAGCTCCCTTCACTCCAATATTTAGAAACTCAACATGGAAGTTGGGGCACTCCTATGTCTCCACTTCTTTCACTTGAGTCGATGGATACTTTGATTCAATCACCTCAAACTGAACAGTCCGAGTCAGATATCATTTCACCCCAAAGCAGTGGTTTGTTGGAAGCAATAGTGTATGAATCACGAGTTCTGAAAGAATCTAAGAGACAGACAAAATCTATGAATTCTACCATGCCCAGTTTTGCTGAGAAATCATCCTTGAAATCTAGACAGAAAGAATGTGCTGAGCACGGAGATCCAAATTATGCTCTGGGTCATTCTGGTGCTTCTGTTCTAAGTGAGCATACTCCTGTCAGCATTTCCTCTGTCGAGGAACCAAGATCAACTGGGACAACACAAGTCAAAGATGTTCCATCTTACTATGTCAAGAAGAAAGAGAAGTCGAAAATAGACCTCACCAGGCCTGATGCTTTGCTTGATCTTGGTTGGTTCACACAAAAGAATCAGGATCAGCGCATTTTATCAGATGCTATACGAGCACTTCTAGGTGAAAACTTTCATGATTGA 1482 0.4244 MMDLREDKKMSKGHRSSLSVEEAKGRKNLGCEVHLKKGPWTSAEDAILVEYVKKHGEGNWNAVQKHSGLARCGKSCRLRWANHLRPDLKKGAFTPEEEDRIVELHAKFGNKWARMAAELPGRTDNEIKNFWNTRIKKMQRAGLPLYPAEVCLRVLNQENHNMGAIVDPEKKHHDHLLAENCDIPEVEFKSLNFSQGYLNYTPTAFNVPESSTLKQFADSNHSYNPMLTVLHPPKRFRESDTFYHYLDGSLSNDIPLSNQYEDCTDENLIDVYSDTSQFIVSDPLGSHAFPNGNYSSSEPISMAMKLELPSLQYLETQHGSWGTPMSPLLSLESMDTLIQSPQTEQSESDIISPQSSGLLEAIVYESRVLKESKRQTKSMNSTMPSFAEKSSLKSRQKECAEHGDPNYALGHSGASVLSEHTPVSISSVEEPRSTGTTQVKDVPSYYVKKKEKSKIDLTRPDALLDLGWFTQKNQDQRILSDAIRALLGENFHD* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01011 493 Gene3D - 36 89 - -
Pte9g01011 493 Pfam Myb-like DNA-binding domain 40 100 - -
Pte9g01011 493 MobiDBLite consensus disorder prediction 372 413 - -
Pte9g01011 493 SUPERFAMILY Homeodomain-like 34 131 IPR009057 -
Pte9g01011 493 FunFam Transcription factor GAMYB 92 138 - -
Pte9g01011 493 CDD SANT 39 84 IPR001005 -
Pte9g01011 493 SMART sant 89 137 IPR001005 -
Pte9g01011 493 SMART sant 36 86 IPR001005 -
Pte9g01011 493 CDD SANT 92 133 IPR001005 -
Pte9g01011 493 MobiDBLite consensus disorder prediction 375 390 - -
Pte9g01011 493 ProSiteProfiles Myb-like domain profile. 32 84 IPR001005 -
Pte9g01011 493 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 85 139 IPR017930 -
Pte9g01011 493 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 84 IPR017930 -
Pte9g01011 493 MobiDBLite consensus disorder prediction 1 23 - -
Pte9g01011 493 ProSiteProfiles Myb-like domain profile. 85 135 IPR001005 -
Pte9g01011 493 FunFam MYB-related transcription factor 36 89 - -
Pte9g01011 493 Gene3D - 92 175 - -
Pte9g01011 493 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 8 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01011 Pte-Chr9 31514025 31518676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01011 35 491 MYB Transcription Factor Family AT5G06100 39.709 9.13e-95 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte9g01011 Myb_DNA-bind_6 5.3e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01011 K09422 - qsa:O6P43_014646 577.4