Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01007 ATGCAGAAAGGAAGTTTGGAGAATCATTTGTTCAGAAAAGGAGTTCAACCTATTGGCTGGGCTACGCGGGTGAATATTGCGGTGGACGTTGCAAGAGGATTATCATTTCTTCACAGCTTGGATGCAAATGTTATATACCGTGATCTGAAGGCTTCAAATATCTTGCTTGATTCGGATTTCAATGCTAAGCTTTCAGATTTTGGCTTAGCAAGGGATGGCCCTACAGGAGATAACACTCATGTATCAACTAGAATTATTGGAACCCGAGGTTATGCTGCTCCTGAGTACGTAGCAACAGGCCACTTGACTGCCAAGAGCGATGTGTATAGTTTCGGGGTTGTTTTGTTAGAGTTGCTGACGGGAAAGCGGGCAATGGATGATGAAAGAGTTGGCTTTGGTGATGAAACACTGGTGGACTGGGCAAAACCCTTTCTGAGTGAGAGCAGACGAGTTTTAAGAATAATGGACACAAGATTGGGAGGTCAGTACTCAAAGAAAAGTGCACAAGCTGCAGCTGCACTGGCATTGCAATGTTTGACTACAGATCCCAAGAATAGGCCTACCATGGTTGATGTCCTAACCACATTGGAAAATCTACAAACAGCAAGGAGACCCCAATTGGGTTCAGACCATCGTAGAGTCAATGATTTGAGGCACGAACGTAGCCATAGGAGTATAGGACATTGA 687 0.4454 MQKGSLENHLFRKGVQPIGWATRVNIAVDVARGLSFLHSLDANVIYRDLKASNILLDSDFNAKLSDFGLARDGPTGDNTHVSTRIIGTRGYAAPEYVATGHLTAKSDVYSFGVVLLELLTGKRAMDDERVGFGDETLVDWAKPFLSESRRVLRIMDTRLGGQYSKKSAQAAAALALQCLTTDPKNRPTMVDVLTTLENLQTARRPQLGSDHRRVNDLRHERSHRSIGH* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01007 228 PANTHER OS01G0588500 PROTEIN-RELATED 1 200 - -
Pte9g01007 228 PIRSF ILK 1 212 - -
Pte9g01007 228 Pfam Protein kinase domain 1 193 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte9g01007 228 MobiDBLite consensus disorder prediction 206 228 - -
Pte9g01007 228 ProSitePatterns Serine/Threonine protein kinases active-site signature. 44 56 IPR008271 GO:0004672|GO:0006468
Pte9g01007 228 FunFam PTI1-like tyrosine-protein kinase 3 1 208 - -
Pte9g01007 228 ProSiteProfiles Protein kinase domain profile. 1 199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte9g01007 228 MobiDBLite consensus disorder prediction 201 228 - -
Pte9g01007 228 SMART serkin_6 1 194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte9g01007 228 Gene3D Transferase(Phosphotransferase) domain 1 1 222 - -
Pte9g01007 228 SUPERFAMILY Protein kinase-like (PK-like) 1 200 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01007 Pte-Chr9 31484957 31487223 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01007 1 202 Glycoside Hydrolase AT3G07070 52.195 6.71e-64 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pte9g01007 Pkinase 5.9e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01007 - - cill:122290806 347.051