Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00983 ATGAGCGGCGGAAACCGAAGACGTGAAAACCGCGACAATAGAAACTCCAAGAAGCAGAAGTTCTTCCGCAACGCCGAGGAAGAGCTCGATTCTAAGTTTGGCTTCGATTTTTTCTCAGAAGGAGAAAAGAGACTTGGCTGGTTGCTCACATTTGCATCGTCATCTTTTGAGGATGAAGAGACCTGCAAAGTCTACAGTTGTGTTGATCTCTATTTTGTTACACAGGATGGTGGTACGTTCAAATCAAAATACAAGTTTCGTCCTTACTTTTATGCTGCCACGAAGGATAAAATGGAGATGGATGTGGAAGCTTATTTGAGAAGGCGGTATGAAAATCAGATTGCAGATATTGACATTGTAGAGAAAGAGGACCTTGATCTTAAAAATCACTTATCTGGCTTGCGGAAATGTTATCTAAAACTCTCATTTGATACTGTACAACAACTAATGAATGTGAAAAGAGACCTGATGCATGTTGTTGAAAGAAATCGGGCGAAGTTTGATGCTGCAGAAGCATATGAGTCCATCTTGACAGGAAAAAGAGAGCAAAAGCCTCAAGATTTTCTGGACTATATTACCGATTTACGAGAATATGATGTTCCTTACCATGTACGATTTGCTATTGACAATGACATAAGGTGTGGACAGTGGTACGATGTTGGTGTGTCCAGTACTGGTGTAACACTTCAGAAGAGAACAGATCTATTACAACGTGCTGAGGTCCGCATATGTGCATTTGACATTGAGACGACTAAACTTCCTCTGAAGTTCCCTGATGCTGAGTATGATCTGGTCATGATGATATCATACATGGTGGATGGGCAGGGGTACTTAATAATCAACAGAGAGTGTGTTGGGGATGATATTGAGGACTTGGAATACACTCCAAAACCAGAATTTGAAGGGTTTTTCAAAGTAACAAATGTGAAAAATGAGGTTGAGCTATTAACGTTGTGGTTTTCTCATATGCGAGAAGTAAAACCTGGAATATATGTGACATACAATGGTGATTTCTTTGACTGGCCATTCCTAGAGAGCAGAGCTGCTTATCATGGCTTTAAAATGAGCAATGAATTGGGATTTCAATGTGACAAGAATCAAGGGGAATGCCGTGCTAAGTTTGCTTGCCATTTAGATTGTTTTGCCTGGGTTAAACGTGATAGTTACCTCCCTCAAGGAAGCCAGGGCTTGAAGGCGGTCACGAAAGCAAAATTGGGCTATGATCCCTTGGAGGTGAACCCCGAAGATATGGTTCATTTTGCGAAGGAGAAACCACAGATGATGGCCTCGTATTCAGTCTCTGATGCTGTTGCCACATATTACTTATACATGACATATGTTCATCCCTTCATATTTTCTCTTGCAACTATCATACCCATGTCACCAGATGAGGTTTTGCGTAAAGGTAGTGGGACCCTATGTGAAATGTTGCTTATAGTTCAGGCTTACAAGGCAAATGTTATTTGTCCCAACAAACACCAATCTGAACCTGAGAAGTTCTACACCAGTCACCTTCTCGAGAGCGAAACATATATTGGTGGCCATGTTGAATGTCTTGAAAGTGGTGTATTTAGGTCTGATCTTCCAACTACATTTAATCTCGATCCATCTGCTTATGAGCAATTGATCAATAACCTTGACCGGGATCTACAATATGCAATAAGAGTAGAGGGAAAGATGGACTTGGAACTAGTATCTAACTATGATGAAGTAAAGAGTGCCATCATGGAAAAGCTCTTAAAATTAAGAGATGAGCCCATACGTGAAGAGTGCCCATTGATTTATCATCTAGATGTAGCTGCTATGTATCCCAATATTATTCTGACAAACAGACTTCAGCCACCGTCTATAGTTACAGACGAGGACTGCACTGCTTGTGATTTTAATCGCCCCGGAAAGAACTGTCTCCGAAAACTTGAGTGGGTTTGGAGAGGAGATATATTCATGGCAAAGAAAAGTGATTATTTTCATTTGAAGAAGCAGATAGAGTCAGAGTTTATTGAAGGTGCTGATGGTCAGTTGTCAAAATCTTTTCTTGAACTTCCCAAGCCAGAGCAACAATCACGACTCAGGGAGCGTTTAAAGAAATACTGTCAAAAGGCATATAAACGAGTTCTTGACAAGCCAGTTACTGAACTTCGTGAAGCAGGGATATGCATGCGTGAAAACCCTTTTCGTGATAGAAGATATGAATATAAAGGACTTAATAAGGTTTGGAAGGGAAAGCTCTCAGAAGCCAAGGCTAGCGGAAATTCTATAAAGATCCAGGAAGCTCAAGACATGGTTGTGCTCTATGACTCGTTACAACTTGCACATAAGTGCATTCTCAATTCTTTCTATGGATATGTCATGCGCAAAGGTGCAAGATGGTATTCCATGGAAATGGCTGGAGTTGTTACCTACACTGGTGCAAAAATAATTCAGAATGCACGCTTGCTGGTAGAGAAAATTGGGAAACCACTTGAGTTGGATACCGATGGTATCTGGTGTGTCCTTCCAGGATCTTTTCCCGAGAATTTTACTTTTAAGACAAGAGATATGAAGAAGTTGACTATTTCATATCCATGTGTCATGCTTAATATCGATGTGGCAAGAAACAACACAAATGATCAATACCAGACACTCACTGATCCAATCAGGAAAACCTATAAAACTCATAGTGAATGCTCCATAGAATTTGAAGTGGATGGGCCATACAAGGCAATGATCCTTCCTGCTTCCAAAGAAGAAGGGATTCTTATTAAGAAGAGATATGCTGTCTTTAATGATGATGGAACCCTGGCTGAGCTTAAAGGCTTTGAGATCAAACGCAGAGGTGAATTGAAGCTCATAAAAGTTTTCCAGGCTGAGCTTTTTGACAAATTTCTCCATGGATCAACAATAGAGGAATGCTATTCTGCAGTCGCTTCTGTTGCAAATCGGTGGCTCGATCTACTTGATAATCAAGGGAAGGATATTGCTGATAGTGAGCTGCTTGATTATATATCAGAATCAAGCACCATGAGCAAGTCCTTAGTAGATTATGGCGAACAGAAATCATGTGCTGTTACTACTGCTAGACGTCTTGCTGACTTTCTTGGTGATACAATGGTGAAAGATAAAGGTCTCCGTTGTCAATACATAGTTGCATGTGAACCCAAGGGAACCCCTGTAAGTGAGCGTGCAGTTCCTGTTGCAATATTCGAAACTGAAACTGAAATAATGAAGTTTTATCTGCGAAAATGGTCCAAAGTTTCATCAGAAGTAGACATTCGGTCCATTGTAGACTGGTCGTACTATAAGCAAAGGCTTAGTTCAGCAATCCAAAAAATTATTACCATCCCTGCTGCAATGCAAAAGGTAGCAAACCCTGTTCCTCGTGTAGTTCATCCTGATTGGTTACATAAAAAAGTTCGTGAAAAAGAAGACAAATTTCGCCAACGGAAACTGGTTGATGTCTTCAATTCAATGAACCGAACTGAACACTCAAAAAAACACACTGAGGTTGTGAGTGACGATACAGGTGAAAAGGCCTTCGACATGGAAGACTTTGGGAACAAAAATCAGAGTTCCAGTAATCAACCTAGACCAATAATACGATGTTTTGAAGTTAGTGAGGGACAAAAGTCTTCCATTACTCAAGGTCAAGTAATTTCTGAGCAGCTTCATACTGATGGTAGGCATCTGCCATTGGAACCATCACAGGAAAACAATTGTCTGTCAGAACAAGTTGAGAAAAATGTAGATTACCAAGGTTGGCTGGAAATAAAGAAGAGAAAGTGGAAACATAACCTACTCGAGAAGAGGAAAAAGCAAAGGTTGAACCATTCAAAGACATCACAAAGTGCTAGTGGTCGTGCTGAACGACCAAACAACCAGATAAATCGCAAATCTCAGGGCAGAACTGATGTGGGATCTTATTTTAGGAGGCCTGAGGCAGATCTCACACGATGCCATTGGGAGATAATACAATTAATTTGGAGCTCACATGATGGTAAATTTTTCGCCTGGGTTGTAGTTGATGGTCTTATGCTTAAAATTCCTGTATCTATCCCAAGAGTGTTCTATCTCAATTCCAAATCACCCATATCTGAAGAGTTTACCGGTAGACAAGTCAACAAGACTCTTCCTCATGGAAGGCTTAACTATAATTTATATGAGGTCACTGTCGATGAAACTCAGTTTAGGACAGAAAGCAAAAAGCTTGCTGCTCTTCTAGCGGATCCTGAAGTTGAGGGGATATATGAAACTAAGGTGCCACTGGAGTTTGATGCCATTATTCAACTTGGTTGTGTTTGTAAAGTAGATAAAACTGCAAAAAAACGCAGTTCCCAGGACTGCTGGAGTGTGAGCGAATTGCAGATGAAAACCACAACCGAATGCCCTTATTTGACTACTTCCATATCTTTTTTCTACTTGTATCATAGCATCTCTGAGAGGCGGGCTATGTATGCTGGCTATTTCCCTGCTTTGAGAACAATTATCGTTGTGGTAGTTAATCCATATCAGAATCAAGAAATAACTCCATCGTTTCTATCAACGCAATTCTCTGATGCATGTCAAGCATTATCTATTGAGCCACCTCCAAGTAACATCAATTTTAAGGTCGAATATGTGGGGCTAGTCAAGGATGCGGAGAAAAGTTTGCAAAGAGCAATAAATGATTACAGGAATGAACATCATGGTCCTACAATTGCTGTCATTGAATGCCCAAATGCTCAATTGATGAAGTTGGGTATACGAATTCTAGAAGATTTTCCATGTGTAACTATCCCTTCCAATGCACGTGATAGTCAATATGAGTTTCTAGTGTGGCAACAAGTGGCAGCCAAAATTGGAATGCAACGTTGTGCTGCATCAACCCAGTGGGTCAATGAGAGAATTTCTCTAGCAAGATATGCTCACGTACCTTTGGGGAATTTTGAACTTGACTGGCTTATCTTTACTGCTGATGTATTCTTCTCAAGAGTATTACGCGATAATCAACAGGTACTTTGGATGTCGGATGATGGAATTCCCGATATAGGTGGTACATGGGAAGAAGAGACGTGTTTTGCTGATGAGGTCTTTCAATCTGTCCGTACTTTTCCTGGAGCATATCGGAAAGTTACAGTCGAGCTAAAGATTCACCACCTGGCTGTCAATGCCCTTCTGAAAAGTAACCAAGTGAATGAAATGGAAGGAGGAGCTTTGCTAGGATTTGATGAGGACTTAAATTCTGGAGCATATGTAAATAATCAAATTAGTGGCTTTGATGAAGGTGATTCATGTGGTCCTGCGTTTAGAATTCTCAAGCAGTTGATACAGAGATGCCTTGCAGATGCAGTTACATCAGGGAATGTGTATGCAGATGCTATATTGCAGCATCTCTATCGATGGCTTTGCAGCCCTAAATCAAAACTTCATGATCCAGCTCTTCACCGTATACTCCACAAGGTCATGCAAAAAGTGTTTGCTCTGTTGTTAGCTGAGTTTCGGAAGTTGGGCGCTTCAGTTGTTTTTGCAAACTTCTCCAAGATTATAATAAACACAGGAAAATATGACATGTGTGCAGCCAAAGCATACTGTGACAGCTTGCTTAAAACTCTGCAATCCAGAGATCTTTTTGAGTGGATTGAGCTTGAACCGGTGCAATTCTGGAATTCGTTGCTTTTCATGGATCAGTATAACTATGGTGGAATACCAGCAAAAACTGATGAAAGCATACATGATGACTCTCAAGTGAATATTGTATCGAGCTGGAATATTGCTGAGTACTTACCGAAAGAAATTCAGGATCATTTTGTATATATTGTCTCTCAGTTTATTTATATTCCTTGGACCTATGCTCAAAAACAAACTGCACTTAGGGCATTTGCACAAGATGGTGATTTCTGTACCCCATCTATCCCTGTTGCAGCTGCCGAATCGTTTGAATTGCAAATGACGGAATATCTTAAAGATCAGATCAGCTCATTCTTTACCGACAAGCTTCTGGGAATTGTTCGTGACACCATTCTTCATATGAAGGGGATGGCAAAATCAGAAAATGACCAGCATATATCATCTGGGATGCCTCAAATTTCAGGCAGCATCCAGAAAGGGCACAAAGGTGATGCTGCCCTTGAATTTATCAAGCATGTCTGTGCTGTGTTGTCCGTCGACCAGAATGTGCTACATGATGTTCTGGTAATGAGAAAAAATCTATTGAAGTATGTCCGTGTGAGAGAGTTTGCTCCAGAAGCTGCATTTTGTGATCCTTGCCCGTCCTTTATCTTACCAAATGTCATATGCAGCTACTGCAACGATTGTCGAGACCTAGACTTGTGTCGTGACTCAGTTCTGCTAGCTCAGGAGTGGTGCTGTTCTGTGCCACAATGTGGCCAGCCTTACGATCGTGAGGTAATGGAGAATTCTCTTCTACAGATTGCGCGACAAAGGGAAAGACTCTACCACCTGCAGGACCTGGTCTGCCTTAGGTGCAATCAGGTCAAAGCTGCTCACTTAGCCGAGCAGTGTGCATGTGCAGGTTCATTTAGGTGCAAGGAAGAAGCCAGTGAATTTCGCAACAAAATGAAGATCCTTTTTAACATAGCCATAAATAGGAAGTTCCAACTACTCCAGGAGTGCACATCATGGATTTTAGAAGTTCCATAG 6615 0.4097 MSGGNRRRENRDNRNSKKQKFFRNAEEELDSKFGFDFFSEGEKRLGWLLTFASSSFEDEETCKVYSCVDLYFVTQDGGTFKSKYKFRPYFYAATKDKMEMDVEAYLRRRYENQIADIDIVEKEDLDLKNHLSGLRKCYLKLSFDTVQQLMNVKRDLMHVVERNRAKFDAAEAYESILTGKREQKPQDFLDYITDLREYDVPYHVRFAIDNDIRCGQWYDVGVSSTGVTLQKRTDLLQRAEVRICAFDIETTKLPLKFPDAEYDLVMMISYMVDGQGYLIINRECVGDDIEDLEYTPKPEFEGFFKVTNVKNEVELLTLWFSHMREVKPGIYVTYNGDFFDWPFLESRAAYHGFKMSNELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVHFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLIVQAYKANVICPNKHQSEPEKFYTSHLLESETYIGGHVECLESGVFRSDLPTTFNLDPSAYEQLINNLDRDLQYAIRVEGKMDLELVSNYDEVKSAIMEKLLKLRDEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEDCTACDFNRPGKNCLRKLEWVWRGDIFMAKKSDYFHLKKQIESEFIEGADGQLSKSFLELPKPEQQSRLRERLKKYCQKAYKRVLDKPVTELREAGICMRENPFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWCVLPGSFPENFTFKTRDMKKLTISYPCVMLNIDVARNNTNDQYQTLTDPIRKTYKTHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVASVANRWLDLLDNQGKDIADSELLDYISESSTMSKSLVDYGEQKSCAVTTARRLADFLGDTMVKDKGLRCQYIVACEPKGTPVSERAVPVAIFETETEIMKFYLRKWSKVSSEVDIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVANPVPRVVHPDWLHKKVREKEDKFRQRKLVDVFNSMNRTEHSKKHTEVVSDDTGEKAFDMEDFGNKNQSSSNQPRPIIRCFEVSEGQKSSITQGQVISEQLHTDGRHLPLEPSQENNCLSEQVEKNVDYQGWLEIKKRKWKHNLLEKRKKQRLNHSKTSQSASGRAERPNNQINRKSQGRTDVGSYFRRPEADLTRCHWEIIQLIWSSHDGKFFAWVVVDGLMLKIPVSIPRVFYLNSKSPISEEFTGRQVNKTLPHGRLNYNLYEVTVDETQFRTESKKLAALLADPEVEGIYETKVPLEFDAIIQLGCVCKVDKTAKKRSSQDCWSVSELQMKTTTECPYLTTSISFFYLYHSISERRAMYAGYFPALRTIIVVVVNPYQNQEITPSFLSTQFSDACQALSIEPPPSNINFKVEYVGLVKDAEKSLQRAINDYRNEHHGPTIAVIECPNAQLMKLGIRILEDFPCVTIPSNARDSQYEFLVWQQVAAKIGMQRCAASTQWVNERISLARYAHVPLGNFELDWLIFTADVFFSRVLRDNQQVLWMSDDGIPDIGGTWEEETCFADEVFQSVRTFPGAYRKVTVELKIHHLAVNALLKSNQVNEMEGGALLGFDEDLNSGAYVNNQISGFDEGDSCGPAFRILKQLIQRCLADAVTSGNVYADAILQHLYRWLCSPKSKLHDPALHRILHKVMQKVFALLLAEFRKLGASVVFANFSKIIINTGKYDMCAAKAYCDSLLKTLQSRDLFEWIELEPVQFWNSLLFMDQYNYGGIPAKTDESIHDDSQVNIVSSWNIAEYLPKEIQDHFVYIVSQFIYIPWTYAQKQTALRAFAQDGDFCTPSIPVAAAESFELQMTEYLKDQISSFFTDKLLGIVRDTILHMKGMAKSENDQHISSGMPQISGSIQKGHKGDAALEFIKHVCAVLSVDQNVLHDVLVMRKNLLKYVRVREFAPEAAFCDPCPSFILPNVICSYCNDCRDLDLCRDSVLLAQEWCCSVPQCGQPYDREVMENSLLQIARQRERLYHLQDLVCLRCNQVKAAHLAEQCACAGSFRCKEEASEFRNKMKILFNIAINRKFQLLQECTSWILEVP* 2205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00983 2204 MobiDBLite consensus disorder prediction 1270 1295 - -
Pte9g00983 2204 FunFam DNA polymerase epsilon catalytic subunit A 729 790 - -
Pte9g00983 2204 Pfam DNA polymerase family B, exonuclease domain 74 400 IPR006133 -
Pte9g00983 2204 SMART polmehr3 239 834 IPR006172 GO:0000166|GO:0003676|GO:0003887
Pte9g00983 2204 SUPERFAMILY Ribonuclease H-like 58 467 IPR012337 -
Pte9g00983 2204 CDD DNA_polB_epsilon_exo 240 444 - -
Pte9g00983 2204 Pfam Domain of unknown function (DUF1744) 1518 1887 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Pte9g00983 2204 Gene3D Palm domain of DNA polymerase 727 928 IPR023211 -
Pte9g00983 2204 FunFam DNA polymerase epsilon catalytic subunit 747 928 - -
Pte9g00983 2204 CDD POLBc_epsilon 504 1113 - -
Pte9g00983 2204 FunFam DNA polymerase epsilon catalytic subunit 240 468 - -
Pte9g00983 2204 SUPERFAMILY DNA/RNA polymerases 469 1130 IPR043502 -
Pte9g00983 2204 Gene3D - 238 468 IPR036397 GO:0003676
Pte9g00983 2204 FunFam DNA polymerase epsilon catalytic subunit 56 227 - -
Pte9g00983 2204 FunFam DNA polymerase epsilon catalytic subunit 932 1116 - -
Pte9g00983 2204 Pfam DNA polymerase family B 749 1072 IPR006134 GO:0000166|GO:0003677
Pte9g00983 2204 Gene3D DNA Polymerase, chain B, domain 1 55 230 - -
Pte9g00983 2204 Gene3D - 932 1116 IPR042087 -
Pte9g00983 2204 MobiDBLite consensus disorder prediction 1260 1298 - -
Pte9g00983 2204 SMART DUF1744_2 1504 1887 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Pte9g00983 2204 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 16 2202 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00983 1 2094 Core DNA Replication Machinery Family AT1G08260 70.446 0.0 3011
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00983 K02324 - cave:132163250 3739.89