Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00980 ATGAGGAGGGCAGTGAAGCGCGAGCTAAGTAGCAGTAGGGGGAACCAAGCTGACGGTGCAGAAAAGCTCAGAGCGGCGAAGCGAGAGAGGGTTAATGGGAACCGAGTTGACAGGGAACACGGCGAGTCTACCGACCCGAGTCACGCAGATCCGATCAACCGTAGGGTTATTCGGTCTGAGTATGCTGCAATTGTCAATCTAATTAATGAGAAGAAGGAAGATTTGGCTAGAGAAGACTCTAATAAATTTAGTCTTATCATGAATGAAGTCGAGAGGTTACATGAACTGGTTCAGAAGCCAAGGGAGCAAGTTGCTGACGCAGAGGCATTGCTGGACTTGGCACAAGCATTAGCTGCATCCGTTAAGTCTATGATTCATGGGGGTGTTACCCCTTCACAATTTGTGCAATCTATGATATCAGAATTTGGAGAATCCAGAAGGGCTTCTACTAGCCGAGAGAATGGCCAAAACAATGTCGACTGGAAACAGATTGGGTTCTCTGTCTCCTCCATGTTCATGACAGTTGATGGATGTCGCACCATGCTTGGACCTATGAACACTGAGTTAAAACAGCGGAAGACTGTGGTCCACAGAAAGCGTGCAAGGGCTACTGAAAGTGCTAGACCTGAAGAGCTTAATCATACTACAGGAGAAGAAAAAACTGATACTGACAGGAATATGGCGACAATGTTTGAGATCCTGAGGAAGAAGAAACATGTCAGACTAGAAAGTTTGATGTTGAACAGAAAGTCTTTTGCACAGACAGTGGAAAATTTGTTTGCTCTATCATTTTTAGTTAAAGATGGTCGTGCTGAGATAACTATCGATGAATTGGGTTCTCATTATGTTTCACCAAGAAATGCTCCTGCTGCTAGCTCTGTGATGTCACGAGAAGTTAGTTATAATCACTTCGTATTCAGATTCGATTACGAGGACTGGAAGTTAATGATGGATAATTTGCCAGTTAAAGAGGACCTGATGCCACATAGGGATGAACCAAGCTCTGTGCCTGCTTTTCAGGCAGAGACTGGAGCATGCGATTCGCGTTCAGTATTGCCCACGACTCCCATCAGAAAACTGTCGAGAAATAGAGGAAGGGTTGTGTCTGACGAATCTATTGTAGAGGAGTCACCTGACAGTGAAAATGATCCAAATGTCAATGGAATCCGTAGATGTAGACGTAAGCTAAATTAA 1194 0.4447 MRRAVKRELSSSRGNQADGAEKLRAAKRERVNGNRVDREHGESTDPSHADPINRRVIRSEYAAIVNLINEKKEDLAREDSNKFSLIMNEVERLHELVQKPREQVADAEALLDLAQALAASVKSMIHGGVTPSQFVQSMISEFGESRRASTSRENGQNNVDWKQIGFSVSSMFMTVDGCRTMLGPMNTELKQRKTVVHRKRARATESARPEELNHTTGEEKTDTDRNMATMFEILRKKKHVRLESLMLNRKSFAQTVENLFALSFLVKDGRAEITIDELGSHYVSPRNAPAASSVMSREVSYNHFVFRFDYEDWKLMMDNLPVKEDLMPHRDEPSSVPAFQAETGACDSRSVLPTTPIRKLSRNRGRVVSDESIVEESPDSENDPNVNGIRRCRRKLN* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00980 397 MobiDBLite consensus disorder prediction 200 220 - -
Pte9g00980 397 MobiDBLite consensus disorder prediction 349 397 - -
Pte9g00980 397 MobiDBLite consensus disorder prediction 192 220 - -
Pte9g00980 397 Pfam Nse4 C-terminal 240 327 IPR014854 -
Pte9g00980 397 PANTHER UNCHARACTERIZED 11 381 IPR027786 GO:0005634|GO:0006281|GO:0030915
Pte9g00980 397 MobiDBLite consensus disorder prediction 1 51 - -
Pte9g00980 397 MobiDBLite consensus disorder prediction 20 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00980 Pte-Chr9 31296271 31298875 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00980 1 396 Non-SMC Element family AT1G51130 51.117 4.62e-133 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00980 K22825 - qsa:O6P43_023730 479.944