Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00949 ATGATACTGGAGGAAGTTCAACAGAGTCACCAACTACAACTGCAGAAGAAGAAGAAGCATCCATATCAGCAGCAGCAGCAATTAGAGATGTGTAAAAAGATGGCACTCGATGCAGCTGCGGTGGAGCGGAAGCTGCAGGCTGCCATGACAGAAGGCTATGATAGTACAGTTGTGGATGGGAGTGAAAATCTTTTCATTCCACCCCTTAATTTTGCTGTGGTGGATAATGGCATTTTCAGGTCTGGTTTCCCTGAATTGTCCAACTTGCCATTCCTAAAAACCCTCAGTCTCCGCTCTATCATATGTCTCTGTCCTGAGCCGTACCCAGAAGCCAACATGGAGTTCCTCAAGGCCAATGGGATCAAGCTTTATCAATTTGGGATTGAAGGTTACAAGGAACCTTTTGCAAACATCCCAGAGGATATGATCCGAGAAGCACTAAACGTCGTGCTTGATATGGAAAATCACCCCGTACTGATTCATTGTAAACGAGGGAAGCATCGAACAGGATGTGTAGTAGGATGCTTAAGAAGAATTGAAAAATGGTGCCTGTCATCTGTGTTTGATGAATATCAGCGATTTGCAGCTGCAAAGGCGAGAGTTTCAGATCAGAGATTCATTGAGCTGTTTGATGTTTCCACCATGAACCTGAAATTTTTTCCAACCACATTTTCATGCTCCCACCCATTCAATTAA 696 0.4397 MILEEVQQSHQLQLQKKKKHPYQQQQQLEMCKKMALDAAAVERKLQAAMTEGYDSTVVDGSENLFIPPLNFAVVDNGIFRSGFPELSNLPFLKTLSLRSIICLCPEPYPEANMEFLKANGIKLYQFGIEGYKEPFANIPEDMIREALNVVLDMENHPVLIHCKRGKHRTGCVVGCLRRIEKWCLSSVFDEYQRFAAAKARVSDQRFIELFDVSTMNLKFFPTTFSCSHPFN* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00949 231 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 66 211 IPR029021 -
Pte9g00949 231 CDD PFA-DSP_Siw14 64 211 - -
Pte9g00949 231 ProSitePatterns Tyrosine specific protein phosphatases active site. 160 170 IPR016130 GO:0016311|GO:0016791
Pte9g00949 231 PANTHER TYROSINE-PROTEIN PHOSPHATASE 43 222 - -
Pte9g00949 231 FunFam probable tyrosine-protein phosphatase At1g05000 64 214 - -
Pte9g00949 231 PRINTS Plant and fungal dual specificity phosphatase signature 65 82 IPR020428 GO:0016791
Pte9g00949 231 PRINTS Plant and fungal dual specificity phosphatase signature 121 135 IPR020428 GO:0016791
Pte9g00949 231 PRINTS Plant and fungal dual specificity phosphatase signature 102 115 IPR020428 GO:0016791
Pte9g00949 231 PRINTS Plant and fungal dual specificity phosphatase signature 138 152 IPR020428 GO:0016791
Pte9g00949 231 Gene3D Protein tyrosine phosphatase superfamily 64 214 IPR029021 -
Pte9g00949 231 ProSiteProfiles Dual specificity protein phosphatase domain profile. 70 226 IPR020422 GO:0006470|GO:0008138
Pte9g00949 231 Pfam Tyrosine phosphatase family 66 215 IPR004861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00949 Pte-Chr9 30907551 31019801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00949 60 227 Protein tyrosine phosphatase (PTP) family AT4G03960 71.429 8.91e-90 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00949 K18045 - qsa:O6P43_020789 298.13