Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00947 ATGCCAAATACACAGAGTCGCTGCTTTCTCTCTGTGTTTTCAAAAATTCAACCCCCCTGCGGAACCCTAGACAAGGGTCAAAAGTTTGTTGTCAAGTTGGTGGGTTTGGCTGCATTTTTCTGGTTATTCCTGTTTTGCGAACAATGCAAAGACTCTTATGCTGATGCAAAGTACCATCGTCTCAATAGAGAGATGGAGAAAGCAACAGATGTTCAGGAAGCAGGTGAGAGCTTGCCTTTGCCTTCACCATCTCCAGAAATACAACCTGGTGAACAGCTGGCCAGTACCAACTATCCTGTCATCATTAGGCCTGGATTTGGAACTTTAGGCAAGCAAATACCATTGCTTTGCAACCACTTTAAGGTTTCTGTCAACAGTTCGGATGCAGTGTTTTACCAGTACAACGTTTCTATAACTTCTGGAGATGACAAACCTATTGAAAGCAAACGCCTAGGGAGAAAACTGATGGATAAACTTTGCAAATCATTTTCTTCTGACCTTGGTGGCGAAAAAGTTGCCTATGATGGAGAGAAAAGTCTCTATACCGTAGTACCTCTGCCACGTAACAATCTTGATTTCTCAGTAGTGCTTGAGGACTCATTTGCAAAACGTAATAATGATGAACTTGACTCTGATGTTGTGAGCCAAGTTATGGCTACTAAGAGGTCAAAACATTCTTTGCGTCCAATTAATTTCAAGTTATCAATCAGTTTCTCAGCCACAGTACCCTTGACTTCCATTGGACTTGCTCTGAAAGGAGAAATCACTGATCATAATGCTCAGGATGTCCTCAGAGTGCTTGATATTATCCTAAGGCAGCAAGCATGTGATAGGGGATGTCTTTTAGTGAGGCAATCTTTCTTTCATGATGACTCAAGTACCTTTTCTGATGTTGGAGGTGGTGTACTTGGGGTTCGCGGTTTCCATTCAAGCTTCCGTCCAACCCAGGGTGGCTTGTGCCTTAACATGGATGTCTCCACAACTATGATCATAAAGCCTGGGCCTGTAATTGATTTTCTTCTTGCTAACCAGAATGTGAAAGAAACAAGATATATCGATTGGACAAAGGCCAAAAAAATGCTTAAAAATTTGAGGGTGAATGCCATTCATCGTGGTGTGGAACTCAAAATTCATGGCCTCAGCGACAGACCTTGCAATCAGCTATTGTACAGTTTCATATCTTTTAGCTGA 1191 0.4207 MPNTQSRCFLSVFSKIQPPCGTLDKGQKFVVKLVGLAAFFWLFLFCEQCKDSYADAKYHRLNREMEKATDVQEAGESLPLPSPSPEIQPGEQLASTNYPVIIRPGFGTLGKQIPLLCNHFKVSVNSSDAVFYQYNVSITSGDDKPIESKRLGRKLMDKLCKSFSSDLGGEKVAYDGEKSLYTVVPLPRNNLDFSVVLEDSFAKRNNDELDSDVVSQVMATKRSKHSLRPINFKLSISFSATVPLTSIGLALKGEITDHNAQDVLRVLDIILRQQACDRGCLLVRQSFFHDDSSTFSDVGGGVLGVRGFHSSFRPTQGGLCLNMDVSTTMIIKPGPVIDFLLANQNVKETRYIDWTKAKKMLKNLRVNAIHRGVELKIHGLSDRPCNQLLYSFISFS* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00947 396 Pfam Argonaute linker 1 domain 283 332 IPR014811 -
Pte9g00947 396 SMART DUF1785_2 281 333 IPR014811 -
Pte9g00947 396 Gene3D paz domain 327 393 - -
Pte9g00947 396 Pfam N-terminal domain of argonaute 111 271 IPR032474 -
Pte9g00947 396 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 89 389 - -
Pte9g00947 396 SUPERFAMILY PAZ domain 113 370 IPR036085 GO:0005515
Pte9g00947 396 MobiDBLite consensus disorder prediction 70 89 - -
Pte9g00947 396 CDD PAZ_argonaute_like 333 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00947 Pte-Chr9 30861220 30864069 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00947 68 390 Eukaryotic Initiation Factors Gene Family AT5G43810 32.931 3.00e-35 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00947 K11593 - cave:132183084 394.43