Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00945 ATGGAGAAAGCAACAGATGTTCAGGAAGCAGGTGAGAGCTTGCCTTTGCCTTCACCATCTCCAGAAATACAACCTGGTGAACAGCTGGCCAGTACCAACTATCCTGTCATCATTAGGCCTGGATTTGGAACTTTAGGCAAGCAAATACCATTGCTTTGCAACCACTTTAAGGTTTCTGTCAACAGTTCGGATGCAGTGTTTTACCAGTACAACGTTTCTATAACTTCTGGAGATGACAAACCTATTGAAAGCAAACGCCTAGGGAGAAAACTGATGGATAAACTTTGCAAATCATTTTCTTCTGACCTTGGTGGCGAAAAAGTTGCCTATGATGGAGAGAAAAGTCTCTATACCGTAGTACCTCTGCCACGTAACAATCTTGATTTCTCAGTAGTGCTTGAGGACTCATTTGCAAAACGTAATAATGATGAACTTGACTCTGATGTTGTGAGCCAAGTTATGGCTACTAAGAGGTCAAAACATTCTTTGCGTCCAATTAATTTCAAGTTATCAATCAGTTTCTCAGCCACAGTACCCTTGACTTCCATTGGACTTGCTCTGAAAGGAGAAATCACTGATCATAATGCTCAGGATGTCCTCAGAGTGCTTGATATTATCCTAAGGCAGCAAGCATGTGATAGGGGATGTCTTTTAGTGAGGCAATCTTTCTTTCATGATGACTCAAGTACCTTTTCTGATGTTGGAGGTGGTGTACTTGGGGTTCGCGGTTTCCATTCAAGCTTCCGTCCAACCCAGGGTGGCTTGTGCCTTAACATGGATGTCTCCACAACTATGATCATAAAGCCTGGGCCTGTAATTGATTTTCTTCTTGCTAACCAGAATGTGAAAGAAACAAGATATATCGATTGGACAAAGGCCAAAAAAATGCTTAAAAATTTGAGGGTGAATGCCATTCATCGTGGTGTGGAACTCAAAATTCATGGCCTCAGCGACAGACCTTGCAATCAGCTATTTTTTCCAATGAAAATAAAAAAAGGTGATGGTGATGATTCTAATGGAGATGCCACAGTTGATATTACTGTTCATGAATATTTTGTAAAACATGTTGGTGTAGAGCTCACCTACTCCCAATACCTGCCTTGTCTAGATGTCGGGAAGCCAAAACGGCCTCACTATCTGCCTTTGGAGGTTTGTTCTCTTGTTTCGCTTCAGCGGTATACTAGATCGTTATCTTCACTGCAGAGAGCTTCTTTGGTCGAAATTTCAAGGCAGAAACCACGGGAAAAAATGCAAACCTTAACAGATGCCGTCAGAAACTACAACTACGACGGGAATCCTATGATTTCTGCATGTGGCATTTCTATTGAGAAACAATTCATGCAGATTGGAGGTCGAATTCTTGATACTCCAAAGTTAAAGGTTGGCAACAATGATGATTGCCTTCCTCGAAATGGAAGATGGAACTTCAACAATAAAACACTTATAGAACCAATTCATATAGAGCACTGGATAATTGTAAATTTTTCTGCTCGCTGTGATACTAGTGCACTTTCTAGGCAGCTAATCAATTGCGGACGGAACAAGGGAATTCAAATTGAGCGCCCTTTCACAATATTGGAAGAAGATCCCCATCTAAGAAAAGGCACCCCTGTCGACAGAGTTGAAGCCATGTATAAAAAGATTGTAGATAGGCTTCCAGGAGCACCTGCCTTGATTCTCTGTGTCCTACCAGAGAGGAAGTGTTCTGACCTGTATGGACCCTGGAAGAAGAAAAGTCTTTGTGAATTTGGCATTGCCACCCAATGCATTGCCCCTACTAAGATCAGTGATCAGTACCTTACAAATGTACTTCTTAAGATCAACGCTAAGCTTGGAGGTATGAATTCCATGTTAGCGATAGAGAAATCTGGTCATGTTCCACTGATACAAGATGCTCCAACAATGATTTTGGGGATGGATGTTTCTCATGGTCCTCATGGCCACGCAGATGCTCCTTCTATTGCTGCGGTTGTTGGATCACGATATTGGCCATTGATTTCAAAGTACAGAGCATCCTTAAGGACACAATCTTCTAAGCTGGAGATGATTGAGGCTCTATATAAGCCTTTGCCAGACGGAAAGGACGATGGTATGATCAGAGAACTGCTGGTGGACTTCTATAAAACCAGTGGAGGACGGAAACCAAATCAAATTATCATATTCAGGGATGGTGTAAGCGAATCTCAATTTAATAAAGTTATGAATATTGAGCTGGACCAGATAATTAAGGCATACCAGCATCTTGGAGAGGTGGATGCTCCGAAGATTACGTTAATTATATGTCAGAAGAAACATCACACTAAACTTTTTCAAGCTGGTGGCCCTGAAAATGTCCCTTCTGGAACAGTTGTTGATGCTGGGATTGTGCATCCCTCAAATTTTGATTTCTTCATGTGTACTCATGGAGGGACGATTGGAACCTCTAGGCCTGCACACTATCATGTTCTGGTAGATGAGATTGGATTCTCAGCTGATGGCATACAAACTCTAATCCATTTATTATCTTATGCGTATCAAAGAAGCACAGCTGCAGTCTCATTGGTGGCACCTGTATGCTATGCCCATCTTGCTGCTGCACAAATGGGACAGTTCATGAAATTTGATGATTCATCAGAAATTTCCTCTAGAAGTCCAACCTCATCAGGAAATCTCCAGGTTCCTGAACTCCCAAGATTACAAGAAAAGGTCAGAGGAACCATGTTCTTCTGTTGA 2712 0.4185 MEKATDVQEAGESLPLPSPSPEIQPGEQLASTNYPVIIRPGFGTLGKQIPLLCNHFKVSVNSSDAVFYQYNVSITSGDDKPIESKRLGRKLMDKLCKSFSSDLGGEKVAYDGEKSLYTVVPLPRNNLDFSVVLEDSFAKRNNDELDSDVVSQVMATKRSKHSLRPINFKLSISFSATVPLTSIGLALKGEITDHNAQDVLRVLDIILRQQACDRGCLLVRQSFFHDDSSTFSDVGGGVLGVRGFHSSFRPTQGGLCLNMDVSTTMIIKPGPVIDFLLANQNVKETRYIDWTKAKKMLKNLRVNAIHRGVELKIHGLSDRPCNQLFFPMKIKKGDGDDSNGDATVDITVHEYFVKHVGVELTYSQYLPCLDVGKPKRPHYLPLEVCSLVSLQRYTRSLSSLQRASLVEISRQKPREKMQTLTDAVRNYNYDGNPMISACGISIEKQFMQIGGRILDTPKLKVGNNDDCLPRNGRWNFNNKTLIEPIHIEHWIIVNFSARCDTSALSRQLINCGRNKGIQIERPFTILEEDPHLRKGTPVDRVEAMYKKIVDRLPGAPALILCVLPERKCSDLYGPWKKKSLCEFGIATQCIAPTKISDQYLTNVLLKINAKLGGMNSMLAIEKSGHVPLIQDAPTMILGMDVSHGPHGHADAPSIAAVVGSRYWPLISKYRASLRTQSSKLEMIEALYKPLPDGKDDGMIRELLVDFYKTSGGRKPNQIIIFRDGVSESQFNKVMNIELDQIIKAYQHLGEVDAPKITLIICQKKHHTKLFQAGGPENVPSGTVVDAGIVHPSNFDFFMCTHGGTIGTSRPAHYHVLVDEIGFSADGIQTLIHLLSYAYQRSTAAVSLVAPVCYAHLAAAQMGQFMKFDDSSEISSRSPTSSGNLQVPELPRLQEKVRGTMFFC* 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00945 903 ProSiteProfiles Piwi domain profile. 558 866 IPR003165 GO:0003676
Pte9g00945 903 Pfam Piwi domain 558 866 IPR003165 GO:0003676
Pte9g00945 903 Pfam Argonaute linker 1 domain 219 268 IPR014811 -
Pte9g00945 903 CDD PAZ_argonaute_like 269 388 - -
Pte9g00945 903 Pfam Argonaute linker 2 domain 415 460 IPR032472 -
Pte9g00945 903 Pfam PAZ domain 273 405 IPR003100 GO:0005515
Pte9g00945 903 FunFam Protein argonaute 3 626 903 - -
Pte9g00945 903 MobiDBLite consensus disorder prediction 1 27 - -
Pte9g00945 903 SMART DUF1785_2 217 269 IPR014811 -
Pte9g00945 903 SUPERFAMILY Ribonuclease H-like 550 864 IPR012337 -
Pte9g00945 903 CDD Piwi_ago-like 433 860 IPR045246 -
Pte9g00945 903 SUPERFAMILY PAZ domain 264 430 IPR036085 GO:0005515
Pte9g00945 903 SMART Piwi_a_2 558 866 IPR003165 GO:0003676
Pte9g00945 903 FunFam Protein argonaute 7 264 393 - -
Pte9g00945 903 Pfam N-terminal domain of argonaute 47 207 IPR032474 -
Pte9g00945 903 ProSiteProfiles PAZ domain profile. 294 389 IPR003100 GO:0005515
Pte9g00945 903 Gene3D - 625 903 IPR036397 GO:0003676
Pte9g00945 903 Gene3D paz domain 263 393 - -
Pte9g00945 903 Gene3D - 453 619 - -
Pte9g00945 903 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 33 868 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00945 Pte-Chr9 30835015 30842887 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00945 4 904 Eukaryotic Initiation Factors Gene Family AT5G43810 36.769 2.37e-168 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00945 K11593 - cave:132183084 1252.27