Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte9g00944 | ATGCCAGAAAACCGGCAAGCCCAGAAACTGAAGAGTGACGTTTCTTCTAATCAATCTGATACTAATATTGAAGAGGCCATTCAGCGTTTGAAAATCAATGATAAACATGATATTGATGCTGTTGTATCATCCATCCCCTACCCAGATCGGCCTGGTGAGCCTGATTGCTCATACTATTTGAAGACTGGGACCTGCAGTTACGGAAGTCACTGTCGCTATAATCATCCTGCTTATATACCAAATGGTGTTAAGTACGGTGGTGAACTACCAGAAAGAGTTGGGCAACCAGATTGTGGGTACTTTCTGAAAACAGGAACTTGTAAGTATGGATCTACGTGTAAGTACCATCATCCAAGGGACAGAAGAGGTGCTGCTCCAGTGTCCATCAATTCTGTTGGTCTTCCCATGCGTCCGGATGAAAAACCATGTCCCTATTACATGCGGACAGGGTCGTGTAAGTTTGGAATTGGTTGCAAGTTTCATCATCCACAGCCTGCAGGAAGCGTCTTACCTCTAGCCTCCTCAGTTATTCCTTCATCAACTCTACCTTATGCTGGTGGATATCCTGCATGGTCAATGCCTAGGATGTCATATGTCACTGGTCCACATGGATTGCCAGTTTATGTTTCTCCTTCTCAAGGAGTTCTACCTGTACAAAGCTGGAACGCCTACATGGGAAACTTGGACCCTGCATCATCTACCAGCATGCTTGGGTCCAATCTTGCTTACAACTCTGCCAACTCGAGTGACCTTGGTTCAACCAATTTCCCTCAGAGACCTGATCAACCAGAGTGCCGACATTTTATCACCACAGGGACCTGCAAGTATGGATCTGATTGCAAGTTCAACCATCCTAAAGAAAGAGTGGCTCAATCCCTTCCAAATTCATTTGGCTTTCCCATGAGACCTGGGCAAGCAATCTGTTCGTATTTTAGAGTTTATGGATATTGCAAATATGGTTCAACATGCAAATTTGATCACCCAATGATGGCACACCCTTATAACTATACCTTGAACCAGCTTTCTGTCGCTGCGCATGATACATTTCTTTCAAGTTACCCAATGAACGTGCCAACAGTTCAGTCATCTGAAAGTTTTCCTATCAAGTCATCAAAATCACCTGAGTTGGCTCAGAAGCCCAATTTTGTTAGAGACAAGCACCAAAAATCTGATGCTAAGGCCACTGAAAATCCATCTAATCCTCCAGATTCTCCGAGCAGGACTTCCTTGATAGACTTTTCAGAGTCTTCGCATGATTCTTCTCACTGA | 1269 | 0.4413 | MPENRQAQKLKSDVSSNQSDTNIEEAIQRLKINDKHDIDAVVSSIPYPDRPGEPDCSYYLKTGTCSYGSHCRYNHPAYIPNGVKYGGELPERVGQPDCGYFLKTGTCKYGSTCKYHHPRDRRGAAPVSINSVGLPMRPDEKPCPYYMRTGSCKFGIGCKFHHPQPAGSVLPLASSVIPSSTLPYAGGYPAWSMPRMSYVTGPHGLPVYVSPSQGVLPVQSWNAYMGNLDPASSTSMLGSNLAYNSANSSDLGSTNFPQRPDQPECRHFITTGTCKYGSDCKFNHPKERVAQSLPNSFGFPMRPGQAICSYFRVYGYCKYGSTCKFDHPMMAHPYNYTLNQLSVAAHDTFLSSYPMNVPTVQSSESFPIKSSKSPELAQKPNFVRDKHQKSDAKATENPSNPPDSPSRTSLIDFSESSHDSSH* | 423 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte9g00944 | 422 | MobiDBLite | consensus disorder prediction | 379 | 393 | - | - | |
Pte9g00944 | 422 | SUPERFAMILY | CCCH zinc finger | 136 | 165 | IPR036855 | GO:0046872 | |
Pte9g00944 | 422 | ProSiteProfiles | Zinc finger C3H1-type profile. | 302 | 330 | IPR000571 | GO:0046872 | |
Pte9g00944 | 422 | Gene3D | - | 242 | 297 | - | - | |
Pte9g00944 | 422 | Gene3D | - | 6 | 86 | - | - | |
Pte9g00944 | 422 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Pte9g00944 | 422 | Gene3D | - | 300 | 363 | - | - | |
Pte9g00944 | 422 | Gene3D | - | 90 | 172 | - | - | |
Pte9g00944 | 422 | MobiDBLite | consensus disorder prediction | 7 | 22 | - | - | |
Pte9g00944 | 422 | MobiDBLite | consensus disorder prediction | 394 | 422 | - | - | |
Pte9g00944 | 422 | ProSiteProfiles | Zinc finger C3H1-type profile. | 92 | 120 | IPR000571 | GO:0046872 | |
Pte9g00944 | 422 | SUPERFAMILY | CCCH zinc finger | 55 | 76 | IPR036855 | GO:0046872 | |
Pte9g00944 | 422 | SUPERFAMILY | CCCH zinc finger | 96 | 121 | IPR036855 | GO:0046872 | |
Pte9g00944 | 422 | MobiDBLite | consensus disorder prediction | 361 | 422 | - | - | |
Pte9g00944 | 422 | PANTHER | PROTEIN PHOSPHATASE RELATED | 7 | 359 | - | - | |
Pte9g00944 | 422 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 304 | 329 | IPR000571 | GO:0046872 | |
Pte9g00944 | 422 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 95 | 119 | IPR000571 | GO:0046872 | |
Pte9g00944 | 422 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 52 | 76 | IPR000571 | GO:0046872 | |
Pte9g00944 | 422 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 139 | 164 | IPR000571 | GO:0046872 | |
Pte9g00944 | 422 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 261 | 286 | IPR000571 | GO:0046872 | |
Pte9g00944 | 422 | SUPERFAMILY | CCCH zinc finger | 301 | 328 | IPR036855 | GO:0046872 | |
Pte9g00944 | 422 | SUPERFAMILY | CCCH zinc finger | 262 | 288 | IPR036855 | GO:0046872 | |
Pte9g00944 | 422 | ProSiteProfiles | Zinc finger C3H1-type profile. | 137 | 165 | IPR000571 | GO:0046872 | |
Pte9g00944 | 422 | SMART | c3hfinal6 | 50 | 77 | IPR000571 | GO:0046872 | |
Pte9g00944 | 422 | SMART | c3hfinal6 | 92 | 119 | IPR000571 | GO:0046872 | |
Pte9g00944 | 422 | SMART | c3hfinal6 | 259 | 286 | IPR000571 | GO:0046872 | |
Pte9g00944 | 422 | SMART | c3hfinal6 | 302 | 329 | IPR000571 | GO:0046872 | |
Pte9g00944 | 422 | SMART | c3hfinal6 | 139 | 164 | IPR000571 | GO:0046872 | |
Pte9g00944 | 422 | MobiDBLite | consensus disorder prediction | 361 | 377 | - | - | |
Pte9g00944 | 422 | ProSiteProfiles | Zinc finger C3H1-type profile. | 259 | 287 | IPR000571 | GO:0046872 | |
Pte9g00944 | 422 | ProSiteProfiles | Zinc finger C3H1-type profile. | 50 | 78 | IPR000571 | GO:0046872 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte9g00944 | Pte-Chr9 | 30823767 | 30828497 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte9g00944 | 7 | 333 | C3H Transcription Factor Family | AT1G04990 | 51.156 | 1.60e-112 | 334 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C3H | Pte9g00944 | zf-CCCH | 3.7e-09 | CL0537 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte9g00944 | - | - | cave:132182298 | 532.332 |