Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00943 ATGCCACGAAACGGAGCAACGGCTGTAGACCCATCACCCGAAATCAAACAGATCGGTCAAGATTCGAACGACCCAGATAAAGAAATCAGATTCCGGGGAGTACGGAAGCGTCCATGGGGCCGATTCGCCGCAGAGATCAGAGATCCTTGGAGGAAAGCTCGTGTTTGGCTTGGTACTTTTGATTCTGCAGAAGAAGCGGCACGGGCTTACGATGCAGCTGCTCGTTCTTTTCGTGGACCTAAAGCCAAGACCAATTTCCCTTTGACTGATCCTGAATCGGGTCTGACGGATTCGATTCGTCTGCACCCACAGGTTTCGGATGATGAGTTCGGTAAGTTTAATCCGGCTCAGGTGACCCGACCGACGTCAAGCGGCATGAGTAGCACCGTTGAGTCTTTCAGTGGTCCAAGGGTTTCGAATCCGCTTCTGAAGGTTCAATGGGGACCAGTGAACCCGATTCCAGCCGATGGTTTCCATAGCGATTGTGATTCTTCATCTTCAGTAATCGATGATGACGATGATTGTGTTCTAACTTCTTCATTTCGTAAAGTTCTACCCTTTGATCTCAATCGACCGCCACCAATGGACTATCAGGATTACGTAGTTGAAGAGCTCCAAGCCACTGCTTTATGCCTTTGA 639 0.4945 MPRNGATAVDPSPEIKQIGQDSNDPDKEIRFRGVRKRPWGRFAAEIRDPWRKARVWLGTFDSAEEAARAYDAAARSFRGPKAKTNFPLTDPESGLTDSIRLHPQVSDDEFGKFNPAQVTRPTSSGMSSTVESFSGPRVSNPLLKVQWGPVNPIPADGFHSDCDSSSSVIDDDDDCVLTSSFRKVLPFDLNRPPPMDYQDYVVEELQATALCL* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00943 212 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 23 170 - -
Pte9g00943 212 FunFam Ethylene-responsive transcription factor 2 30 88 - -
Pte9g00943 212 Gene3D AP2/ERF domain 29 89 IPR036955 GO:0003700|GO:0006355
Pte9g00943 212 SUPERFAMILY DNA-binding domain 31 88 IPR016177 GO:0003677
Pte9g00943 212 Pfam AP2 domain 30 79 IPR001471 GO:0003700|GO:0006355
Pte9g00943 212 SMART rav1_2 30 93 IPR001471 GO:0003700|GO:0006355
Pte9g00943 212 ProSiteProfiles AP2/ERF domain profile. 30 87 IPR001471 GO:0003700|GO:0006355
Pte9g00943 212 CDD AP2 30 87 IPR001471 GO:0003700|GO:0006355
Pte9g00943 212 MobiDBLite consensus disorder prediction 1 30 - -
Pte9g00943 212 PRINTS Ethylene responsive element binding protein signature 31 42 IPR001471 GO:0003700|GO:0006355
Pte9g00943 212 PRINTS Ethylene responsive element binding protein signature 53 69 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00943 Pte-Chr9 30811702 30813268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00943 23 137 AP2-EREBP Transcription Factor Family AT1G50640 62.308 3.01e-38 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte9g00943 AP2 4.4e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00943 K09286 - qsa:O6P43_014526 263.077