Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00925 ATGCCACCGAACCGCCCTTCATGGATGGTAGACCCCGACCTAGACGAAATCGACTTAGACCCAGCAGATTTCGGTTCCTCGATACCACTAAAGAAGGTGCCGTATGGAGACGTCTTCGAAGCTTCACGAGCCGGCGATGTCGAGCGCCTCCGCTACCTACTCGAGTCCGGTGTCAATGTCAACGCCAGGGACCAGTGGGACTCTGTTGCTTTGTACTATGCTTGTCTCGCTGGTCATCTTGATGCAGCTCGTATGTTGCTTGAGAGTGGGGCTATTTGCTCTGAACACACCTTTGACGGTGACCGTTGTCACTATGCTGCACTCAATTTGAAGGTGAGGAAGTTGTTGAAAGCTTTTGAAGCTAGACCGCCGCCTCTTGGTCCACTACAAGCTGCCTTGAGAGATACTTTCTTGTCTTGCGTCGCCAATAGGAGCTATTTGGAGCAAGCTGATCTTCAGTTTCAAATATCAGGTCTTTCATCCACTCAGGGATCCAGTTGGAGCAACTTTCCGCCAGATGTGGTTTTTGTTGTCCAAGGCAGACCTATTGAAGCTCATAGAGTCATATTAAGTGCAAGATCCCCATTTCTTAAGAAAAAGTTTGAGAAAGACTGGAGAGAGCGGAGGGAAATAAGATTTGCAAGGGAAAAGCTTTCATATCCTGCTCTTTATAGTCTTGTGCACTTCTTTTATTCTGATCGCCTAGAGATTGCCATAGATGACATGGAAGACCTTGTGAGAATCTGCAAAGTATGCAAGTGTGAATCATTGCAGAGGATTATTGAAAAAGAATTGATACACCAAAAATTTGCTGAGTACAAAGCACTGAGAGATATTGACAACTCTCAAAAACGGTTTATCTTACAGGGTCTTTCTCTTCCAGAAGATGATAGGCTTCCTGCATCATTGCACCGTATACTTCAGATTTCACTCTCAAATTGCACTGGTGAAGACTACCTGGGGGATGACGTTAAGAAACTGATATTACATGTTAGTGGATTGCAGATTAATCGCCTTGTAGATGATCTTGCAGATGTCTGTGTAAGAGTGGATAAAAGGATCTTCCGTTGCCACCAAGTTATCCTAGCATCCAGGTCTGAATATTTCAAAGCAAGACTATCTAGGATGAAGGAATTTCATGAAGAGAGAGATAATTTTTCTCTTGGATACCTTCCATGTCTTGAAGAGCATGATTTGAGCTCTGAAGCATTTGAGAAGATGGTTGAATATATGTATACAGACAGTCTGAAGGAGATAGACCCCAATCAGGTTGAAGAAATGTTTGATGCTTCTTCAAGATACTTACTATTTCCTTTAAAGCGCGCTGTTGCTGATGTGTTGCTGCCACACTTGGAATTGGTCTCACCGGCAGAACTTTGTCATTGGTTAATACTAGCTGACATGTACGGTACTTTAGTCCCTCTGCCACATTATTCTTCAAGAACTAAATGA 1452 0.436 MPPNRPSWMVDPDLDEIDLDPADFGSSIPLKKVPYGDVFEASRAGDVERLRYLLESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDRCHYAALNLKVRKLLKAFEARPPPLGPLQAALRDTFLSCVANRSYLEQADLQFQISGLSSTQGSSWSNFPPDVVFVVQGRPIEAHRVILSARSPFLKKKFEKDWRERREIRFAREKLSYPALYSLVHFFYSDRLEIAIDDMEDLVRICKVCKCESLQRIIEKELIHQKFAEYKALRDIDNSQKRFILQGLSLPEDDRLPASLHRILQISLSNCTGEDYLGDDVKKLILHVSGLQINRLVDDLADVCVRVDKRIFRCHQVILASRSEYFKARLSRMKEFHEERDNFSLGYLPCLEEHDLSSEAFEKMVEYMYTDSLKEIDPNQVEEMFDASSRYLLFPLKRAVADVLLPHLELVSPAELCHWLILADMYGTLVPLPHYSSRTK* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00925 483 CDD BTB_POZ_ZBTB_KLHL-like 343 434 - -
Pte9g00925 483 Gene3D Potassium Channel Kv1.1; Chain A 332 472 IPR011333 -
Pte9g00925 483 Gene3D Potassium Channel Kv1.1; Chain A 162 287 IPR011333 -
Pte9g00925 483 ProSiteProfiles BTB domain profile. 344 420 IPR000210 GO:0005515
Pte9g00925 483 FunFam BTB/POZ domain-containing protein 32 155 - -
Pte9g00925 483 ProSiteProfiles BTB domain profile. 172 239 IPR000210 GO:0005515
Pte9g00925 483 SUPERFAMILY POZ domain 333 450 IPR011333 -
Pte9g00925 483 SUPERFAMILY POZ domain 165 267 IPR011333 -
Pte9g00925 483 FunFam BTB/POZ domain-containing protein 166 288 - -
Pte9g00925 483 SMART BTB_4 344 451 IPR000210 GO:0005515
Pte9g00925 483 SMART BTB_4 172 269 IPR000210 GO:0005515
Pte9g00925 483 Gene3D - 37 161 IPR036770 -
Pte9g00925 483 SUPERFAMILY Ankyrin repeat 40 117 IPR036770 -
Pte9g00925 483 Pfam BTB/POZ domain 170 268 IPR000210 GO:0005515
Pte9g00925 483 Pfam BTB/POZ domain 342 447 IPR000210 GO:0005515
Pte9g00925 483 Pfam Ankyrin repeats (many copies) 40 87 IPR002110 GO:0005515
Pte9g00925 483 ProSiteProfiles Ankyrin repeat profile. 41 65 IPR002110 GO:0005515
Pte9g00925 483 PANTHER ANKYRIN REPEAT AND BTB/POZ DOMAIN-CONTAINING PROTEIN 1 12 470 IPR044515 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pte9g00925 BTB 8.8e-15 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00925 K10520 - qsa:O6P43_020762 780.4