Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00909 ATGTCCAATTCCAATAGTCACAGCAATTCTCATGCTGAACCTCCTAGCTGTTGCCCGTCTTCTGAAACAAAAGCAGCTTCAACTGAGCTGAAACTGTACCAAGCATTCATATTCTCGGGACCTATCCTATTCACTTTTATTCTTCTCTTATTGTTTTACTTTTTCTATCTTAGAAGACAAAGAGTAGACTGGTCTTCTCTTACAATGAGAGCGTCTGCAGCGAGTGACGTGGATTCCTCCATGGAGCCTGAATTAGGTCTGAAGAAAGAGTTAAGAGAGATGCTACCCGTTGTTATATATAACGAAAGCTTCACTGTTAAAGATTCACAATGTTCGGTATGCCTTCTGGATTACAAGGCTGAAGATAGACTTCAACAGATACCAACATGTGGTCATACTTTCCATGTGAACTGTATTGATCTTTGGCTTGCTAACCATAGCACCTGTCCTCTTTGTCGGTTGTCTCTTCTTGCACCAAAGCATTCACCGGCAGAGCAAGCTTCTGTGCTGCATAACATGACGACTCATGAAGAAATGCCTACTAGAGAATCACCAGAATTGAGATCTTTGGGAGATGCAACCGTTCCTCCGAACTGCTAG 600 0.425 MSNSNSHSNSHAEPPSCCPSSETKAASTELKLYQAFIFSGPILFTFILLLLFYFFYLRRQRVDWSSLTMRASAASDVDSSMEPELGLKKELREMLPVVIYNESFTVKDSQCSVCLLDYKAEDRLQQIPTCGHTFHVNCIDLWLANHSTCPLCRLSLLAPKHSPAEQASVLHNMTTHEEMPTRESPELRSLGDATVPPNC* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00909 199 CDD RING-H2_EL5-like 110 153 - -
Pte9g00909 199 Pfam Ring finger domain 110 153 IPR001841 -
Pte9g00909 199 PANTHER OS11G0150450 PROTEIN 44 181 - -
Pte9g00909 199 MobiDBLite consensus disorder prediction 1 20 - -
Pte9g00909 199 SMART ring_2 111 152 IPR001841 -
Pte9g00909 199 MobiDBLite consensus disorder prediction 175 199 - -
Pte9g00909 199 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 73 158 IPR013083 -
Pte9g00909 199 ProSiteProfiles Zinc finger RING-type profile. 111 153 IPR001841 -
Pte9g00909 199 FunFam RING-H2 finger protein ATL7 77 159 - -
Pte9g00909 199 SUPERFAMILY RING/U-box 94 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00909 Pte-Chr9 30317893 30324223 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00909 4 177 C3H Transcription Factor Family AT4G10150 55.435 1.20e-62 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00909 K19039 - qsa:O6P43_001690 218.779