Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00906 ATGTCTTCTTCTTCAACATCATCATCGTCACCATCAATTTCATCTGAAGATGACAATGGCAGCAGTGGTCCTGGACCTAGGGAAAGGGGAGAGGCTGATGATGAAGGTCCATCCTCGTATCGTAGACGTTCTCAAAGTGATGTTTGGCCTGAACCATTCGTCGAAGCCCTTGCTGCCCAAGTTGCCATTGAAGCTTCTCGCTCTATTGGTCGCCTAGCTGCAGCTACTGCACTAGCTAACATATTTCAGGTCTGTTCCACGTTGCGAGCCGTCTCTCGATCAGAGCTGTTGTGGCACCGTCTGACTCGTAGAGTATGGCGTCGGTCAGTTCTTTTACATGCCACATGGCGAGATGAGTACATCTATTGGCATCGTACGGCTAGAAATTTCAGAATAGGTAGATCCACGTACACCGTCTTACACTGTGTCCCAGACAATCATACTCACAACGACCCAGATAGCCTCATCTGTCGGTGCCTCACCCTCTCCGACTTCCACCTCGCCTGTGGTTTCATTGACGGCGCCGTTCGGCTCTTCGATCTCAATACCTACGTACAGGTCACCACGTTCCGTCCTAATCAGCAAATTCAGATAGGCCAATTTTCAAGAGCGGTGTCTGGCATCGTCATCAGTAATTCAAGGCTCGTATTTGCCACGTTGGATGGGGATATCTATGTGGCAACAATTAATGGGCCGCCCCAAACTCGTCAGGCCCGTGAAGGTGATCTCGTGACGAATGGGGTGTTAGTAGACTTTGCTGGTTGCGGGCGTTGGTGGGTGGGTCTCTTTGCAGGGGTACCGGGTCAGGCTTTCCACATATGGGATGCACACAGAGAAGAACCTGTTTTTGTGGGTGGGTCATTGACCGATCCAGAATCGCTAATGGGCTGGCATATGTTGACTGAGTTACCGGAGTTGACCGAGTTTGTGGGCCGAGTCCGTGTCACACGTGAATCAGCCGTGGCATGCACGAGAGGACGTCTGATATTATTTAACGCAAGAGACCAAGGAATTCAATTGGGTGAAGAGTCCAGGAGAGGAATCATTGTGACCTCACTTGATGTGAGCCACGAGGCGTACATGATCGTAGATGATCGTGGTGTAGCTAGTGTGCGCAGAGTGAACACGTTAAATGAGATATGCAGGTTTCCCATTAGAGGGTTCTCTGGTCAGAGAGGACTACTGGGGTGTTTGAATTTGGGGTATGCAGTCATTTACACAGGCGGTGTGATAAGGGTGTGGGAAGCGGAGCATGGTCATTATCTCTATGATTTTAGGGAACCACTTGGAGAAGTCAATGCAATGGTTGAAAACAACAGATATGTTGCAGTGTCATGCAATTACCCAACCATACACCTGTGGGATTTTGGGGACAGAGATGGATAG 1386 0.4964 MSSSSTSSSSPSISSEDDNGSSGPGPRERGEADDEGPSSYRRRSQSDVWPEPFVEALAAQVAIEASRSIGRLAAATALANIFQVCSTLRAVSRSELLWHRLTRRVWRRSVLLHATWRDEYIYWHRTARNFRIGRSTYTVLHCVPDNHTHNDPDSLICRCLTLSDFHLACGFIDGAVRLFDLNTYVQVTTFRPNQQIQIGQFSRAVSGIVISNSRLVFATLDGDIYVATINGPPQTRQAREGDLVTNGVLVDFAGCGRWWVGLFAGVPGQAFHIWDAHREEPVFVGGSLTDPESLMGWHMLTELPELTEFVGRVRVTRESAVACTRGRLILFNARDQGIQLGEESRRGIIVTSLDVSHEAYMIVDDRGVASVRRVNTLNEICRFPIRGFSGQRGLLGCLNLGYAVIYTGGVIRVWEAEHGHYLYDFREPLGEVNAMVENNRYVAVSCNYPTIHLWDFGDRDG* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00906 461 MobiDBLite consensus disorder prediction 1 21 - -
Pte9g00906 461 PANTHER WD40 REPEAT PROTEIN 12, 37 8 439 - -
Pte9g00906 461 SUPERFAMILY F-box domain 76 158 IPR036047 GO:0005515
Pte9g00906 461 Gene3D - 125 460 IPR015943 GO:0005515
Pte9g00906 461 MobiDBLite consensus disorder prediction 22 41 - -
Pte9g00906 461 SUPERFAMILY WD40 repeat-like 153 456 IPR036322 GO:0005515
Pte9g00906 461 MobiDBLite consensus disorder prediction 1 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00906 Pte-Chr9 30261029 30266203 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SAP Pte9g00906 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00906 - - qsa:O6P43_020721 579.326