Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00905 ATGGGACGTTCACCTTGTTATGAGAAAGCTCACACCAACAAAGGTGCCTGGACCAAAGAAGAAGATCAGTGCCTCATAGAATACATACGTGTTCATGGTGAAGGCTGCTGGCGCTCTCTTCCAAGAGTTGCTGGTTTGCTTAGATGTGGCAAGAGCTGTAGATTAAGAAACGCTTCTCCAACATATATGGCTTATGCAGAAGCTACGAAGCAAAGCGAAGTTGAAGTTGCCCAAAAAGTGAAGCCTGAAACAGAGAAAAGTGAAGATGAAGGCAACGATGGGTGA 285 0.4526 MGRSPCYEKAHTNKGAWTKEEDQCLIEYIRVHGEGCWRSLPRVAGLLRCGKSCRLRNASPTYMAYAEATKQSEVEVAQKVKPETEKSEDEGNDG* 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00905 94 CDD SANT 16 56 IPR001005 -
Pte9g00905 94 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 57 - -
Pte9g00905 94 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 56 IPR017930 -
Pte9g00905 94 MobiDBLite consensus disorder prediction 75 94 - -
Pte9g00905 94 SUPERFAMILY Homeodomain-like 9 56 IPR009057 -
Pte9g00905 94 Gene3D - 12 59 - -
Pte9g00905 94 FunFam MYB-related transcription factor 13 63 - -
Pte9g00905 94 Pfam Myb-like DNA-binding domain 14 56 IPR001005 -
Pte9g00905 94 SMART sant 13 63 IPR001005 -
Pte9g00905 94 ProSiteProfiles Myb-like domain profile. 9 56 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00905 Pte-Chr9 30242742 30243477 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00905 1 56 MYB Transcription Factor Family AT4G09460 87.500 9.07e-32 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte9g00905 Myb_DNA-binding 2.9e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00905 K09422 - pvy:116108447 116.701