Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00904 ATGTTGAGTAGAGGGTTTAAGGATCAGATATATGATGTCTACAGATATCTCCCACCGGAACTTCAGGTTGTCTTGGTGTCTGCAACTCTGCCTCATGAAATACTGGAGATGACAAATAAGTTCATGACAGATCCCGTGCGCATTCTTGTAAAACGTGATGAGTTGACTTTAGAGGGTATTAAGCAATTTTTTGTTGCTGTTGAGAGAGAAGAGTGGAAGTTTGATACCCTTTGTGATCTTTATGATACACTTACCATTACTCAGGCCGTAATATTCTGTAACACAAAGCGAAAGGTGGACTGGCTCACTGAAAGAATGCGTTCAAATAATTTCACTGTTTCGTCTATGCATGGAGATATGCCTCAGAAGGAGAGAGATGCAATCATGTCTGAATTTAGAAGTGGGGAAACGCGAGTTTTGATCACAACAGATGTTTGGGCTCGAGGTCTTGATGTTCAACAGGTCTCTCTAGTTATCAATTATGACCTTCCAAATAATCGAGAGCTTTACATTCATCGGATTGGTCGTTCTGGCCGGTTTGGACGCAAGGGTGTCGCTATTAACTTTGTTAAGAATGATGATATCAAAATCTTGAGGGACATAGAGCAATATTACAGTACCCAGATTGATGAGATGCCAATGAATGTGGCTGATCTTATTTAA 663 0.4042 MLSRGFKDQIYDVYRYLPPELQVVLVSATLPHEILEMTNKFMTDPVRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTERMRSNNFTVSSMHGDMPQKERDAIMSEFRSGETRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVADLI* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00904 220 SMART helicmild6 100 181 IPR001650 -
Pte9g00904 220 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 59 220 IPR001650 -
Pte9g00904 220 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 203 IPR027417 -
Pte9g00904 220 Pfam Helicase conserved C-terminal domain 73 181 IPR001650 -
Pte9g00904 220 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 1 203 - -
Pte9g00904 220 CDD SF2_C_DEAD 60 190 - -
Pte9g00904 220 Gene3D - 1 55 IPR027417 -
Pte9g00904 220 Gene3D - 56 220 IPR027417 -
Pte9g00904 220 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 48 IPR014001 -
Pte9g00904 220 FunFam Eukaryotic initiation factor 4A-III 54 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00904 Pte-Chr9 30193415 30196718 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00904 1 221 Eukaryotic Initiation Factors Gene Family AT3G19760 93.213 1.28e-156 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00904 K13025 - nnu:104587558 437.187